MCAT Organic Chemistry Review 2018-2019

(singke) #1

Synthesis of α-Amino Acids


Phosphorus-Containing Compounds


Peptide bonds   form    by  condensation    reactions   and can be  cleaved hydrolytically.

Resonance   of  the peptide bond    restricts   motion  about   the C–N bond,   which   takes   on  partial
double-bond character.
Strong acid or base is needed to cleave a peptide bond.

Polypeptides    are made    up  of  multiple    amino   acids   linked  by  peptide bonds.  Proteins    are large,
folded, functional polypeptides.

Biologically,   amino   acids   are synthesized in  many    ways.   In  the lab,    certain standardized
mechanisms are used.
The Strecker synthesis generates an amino acid from an aldehyde.

An  aldehyde    is  mixed   with    ammonium    chloride    (NH 4 Cl)   and potassium   cyanide.    The ammonia
attacks the carbonyl carbon, generating an imine. The imine is then attacked by the cyanide,
generating an aminonitrile.
The aminonitrile is hydrolyzed by two equivalents of water, generating an amino acid.

The Gabriel synthesis   generates   an  amino   acid    from    potassium   phthalimide,    diethyl
bromomalonate, and an alkyl halide.

Phthalimide attacks the diethyl bromomalonate,  generating  a   phthalimidomalonic  ester.
The phthalimidomalonic ester attacks an alkyl halide, adding an alkyl group to the ester.
The product is hydrolyzed, creating phthalic acid (with two carboxyl groups) and converting
the esters into carboxylic acids.
One carboxylic acid of the resulting 1,3-dicarbonyl is removed by decarboxylation.

Phosphorus  is  found   in  inorganic   phosphate   (Pi),   a   buffered    mixture of  hydrogen    phosphate
and dihydrogen phosphate
Phosphorus is found in the backbone of DNA, which uses phosphodiester bonds. In forming
these bonds, a pyrophosphate (PPi, ) is released. Pyrophosphate can then be hydrolyzed
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