9780521516358book.pdf

(lily) #1
assay. It is essential that the substrate and product do not absorb at the same
wavelength and that the Beer–Lambert law (Section 12.2.2) is obeyed for the chosen
analyte. A large number of common enzyme assays are based on the interconversion
of NAD(P)þand NAD(P)H. Both of these nucleotides absorb at 260 nm but only the
reduced form absorbs at 340 nm. Enzymes that do not involve this interconversion
can be assayed by means of acoupled reactionthat involves two enzyme reactions
linked by means of common intermediates. The assay of 6-phosphofructokinase (PFK)
(EC 2:7:1:11) coupled to fructose-bisphosphatase aldolase (FBPA) (EC 4.1.2.13)
and glyceraldehyde-3-phosphate dehydrogenase (G3PDH) (EC 1:2:1:12) illustrates
the principle:

D-fructose-6-phosphate

PFK+Mg2+

G3PDH+Pi

ATP ADP FBPA

NADH NAD+

D-fructose-1,6-bisphosphate

D-glyceraldehyde-
phosphate

glycerone
phosphate

1,3-bisphosphoglyceric +
acid

The assay mixture would containD-fructose-6-phosphate, ATP, Mg^2 þ, FBPA, G3PDH,
NADþand Piall in excess so that the reaction would go to completion and the rate of
reduction of NADþand the production of NADH and hence the increase in absorbance
at 340 nm, would be determined solely by the activity of PFK added to the reaction
mixture in a known volume of the test enzyme preparation. In principle there is no
limit to the number of reactions that can be coupled in this way provided that the
enzyme under investigation is always present in limiting amounts.

(a)

Minutes

Product produced (μmol)

1

t 0 t 1 10 t 2 20 30

2

3

4 units

2 units

1 unit
B A

C

(b)

Rate (μmol min

–1)

0.2

1

0.4

0.6

23 4
Units of enzyme

t 1

t 2

t 0

Fig. 15.11The importance of measuring the initial rate in the assay of an enzyme. (a) Time-dependent variation
in the concentration of products in the presence of 1, 2 and 4 units of enzyme; (b) variation of reaction rate
with enzyme concentration using true initial rate (v 0 ) and two fixed time assays (t 1 andt 2 ).

603 15.3 Analytical methods for the study of enzyme reactions

Free download pdf