Methods in Molecular Biology • 16 Enzymes of Molecular Biology

(Nancy Kaufman) #1

194 Pingoud, Alves, and Geiger



  1. Armstrong, K. and Bauer, W. K (1982) Preferential site-dependent cleavage
    by restriction endonuclease PstI. Nucleic Acids Res. 70, 993-1007.

  2. Alves, J., Pingoud, A., Haupt, W., Langowski, J., Peters, F., Maass, G., and
    Wolff, C. (1984) The influence of sequence adjacent to the recognition site
    on the cleavage of oligodeoynucleotides by the EcoRI endonuclease. Eur. J.
    Biochem. 140, 83-92.

  3. Wolfes, H., Fliess, A., and Pingoud, A. (1985) A comparison of the struc-
    tural requirements for DNA cleavage by the isoschizomers HaelII, BspRI,
    and BsuRI. Eur. J. Biochem. 150, 105-110.

  4. Ruben, G., Spielman, P., Tu, C. D., Jay, E., Siegel, B., and Wu, R. (1977)
    Relaxed circular SV40 DNA as cleavage intermediate of two restriction endo-
    nucleases. Nucleic Acids Res. 4, 1803-1813.

  5. Rubin, R. A. and Modrich, P. (1978) Substrate dependence of mechanism of
    EcoRI endonuclease. Nucleic Acids Res. 5, 2991-2997.

  6. Halford, S. E., Johnson, N. P., and Grinsted, J. (1979) The reactions of the
    EcoRI and other restriction endonucleases. Biochem. J. 179, 353-365.

  7. Hinsch, B. and Kula, M.-R. (1981) Reaction kinetics of some important site-
    specific endonucleases. Nucleic Acids Res. 9, 3159-3174.

  8. Potter, B. V. L. and Eckstein, F. (1984) Cleavage of phosphothioate-substi-
    tuted DNA by restriction endonucleases. J. Biol. Chem. 259, 14,243-14,248.

  9. Taylor, J. W., Ott, J., and Eckstein, F. (1985) The rapid generation of oligo-
    nucleotide-directed mutations at high frequency using phosphorothioate-modi-
    fied DNA. Nucleic Acids Res. 13, 8765-8785.

  10. Thielking, V., Alves, J., Fliess, A., Maass, G., and Pingoud, A. (1990) The
    accuracy of the EcoRI restriction endonuclease: binding and cleavage stud-
    ies with oligodeoxynucleotide substrates containing degenerate recognition
    sequences. Biochemistry, 29, 4682-4691.

  11. Connolly, B., Eckstein, F., and Pingoud, A. (1984) The stereochemical course
    of the restriction endonuclease EcoRI catalyzed reaction. J. Biol. Chem. 259,
    10,760-10,763.

  12. Landgraf, A. (1987) Genauigkeit der Restriktionsendonuklease EcoRV. Diploma
    thesis, University of Hannover.

  13. Taylor, J. W. and Halford, S. E. (1989) Discrimination between DNA Sequences
    by the EcoRV restriction endonuclease. Biochemistry 28, 6198~i207.

  14. Bodnar, J. W., Zempsky, W., Warder, D., Bergson, C., and Ward, D. C. (1983)
    Effect of nucleotide analogs on the cleavage of DNA by the restriction enzymes
    AluI, DdeI, HinfI, RsaI, and TaqI. J. Biol. Chem. 258, 15,206-15,213.

  15. Fliess, A., Wolfes, H., Rosenthal, A., Schwellnus, K, Blrcker, H., Frank, R.,
    and Pingoud, A. (1986) Role of thymidine residues in DNA recognition by
    the EcoRI and EcoRV restriction endonucleases. Nucleic Acids Res. 14,
    3463-3474.

  16. McLaughlin, L. W., Leong, T., Benseler, F., and Piel, N. (1988) A new approach
    to the synthesis of a protected 2-aminopurine derivative and its incorporation into
    oligodeoxynucleotides containing the EcoRI and BamHI recognition sites. Nucleic
    Acids Res. 16, 5631-5644.

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