Computational Chemistry

(Steven Felgate) #1

Work in one of the conventional fields is not, by tradition, regarded as com-
putational chemistry, but it can become such if the principles of computational
chemistry (such as computational characterization of putative intermediates and
transition states) are applied to a problem in the field.
Theoretical chemistry rates some special mention in this context. Nowadays this
activity tends to be quite mathematical [1], but history shows us that theoretical
chemistry need not be mathematical at all. From the first years of the crystallization
of chemistry as a subject distinct from alchemy, chemists have utilized theory, in
the sense of disciplined speculation. Nonmathematical examples are found in the
structural theory of organic chemistry [2] and in most applications of the powerful
Woodward–Hoffman orbital symmetry rules [3].


References



  1. Wilson EK (1996) Chemical and Engineering News, August 19, p 35

  2. (a) Nye MJ (1993) From chemical philosophy to theoretical chemistry. University of California
    Press, Berkeley, CA. (b) Gould RF (ed) (1966) Kekule symposium, Advances in Chemistry
    Series. American Chemical Society Publications, Washington, DC

  3. Woodward RB, Hoffmann R (1970) The conservation of orbital symmetry. Verlag Chemie,
    Weinheim


Chapter 1, Harder Questions, Answers


Q3


The properties of a molecule that are most frequently calculated are geometry,
energy (compared to that of other isomers), and spectra. Why is it more of a
challenge to calculate “simple” properties like melting point and density?
Hint: Is there a difference between a molecule X and the substance X?
Properties like geometry, energy, and spectra are characteristics of single mole-
cules (with the reservation that close contact with other molecules, especially
solvation or crystal packing, can affect things), while melting point and density
are bulk properties, arising from an ensemble of molecules. Clearly it should be
easier to deal with a single molecule than with the hundreds or thousands (at least)
that make up even a tiny piece of bulk matter.
Melting points have been calculated [1] extracting thermodynamic information
about the solid and liquid phases by molecular dynamics simulations [2].



  1. E.g. (a) Melting point of NaCl: Anwar J, Frenkel D, Noro MN (2003) J Chem Phys 118:728;
    (b) Melting point of a GaN crystal: Harafuji K, Tsuchiya T, Kawamura K (2003) Phys Status
    Solidi 0 (7):2420

  2. Haile JM (1992) Molecular dynamics simulation. Wiley, New York


Answers 587

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