responsible for the movement of all species (cationic, anionic and neutral) along
the capillary towards the detector and is the basis of the technique. The strength
of the EOFin fused-quartz capillaries filled with a running buffer arises from
the ionization of the surface silanol groups (SiOH) on the inner wall above
about pH 4. Hydrated buffer cations accumulate close to the negatively charged178 Section D – Separation techniques
Table 1. A comparison of classical gel and capillary electrophoresis
Classical gel Capillary
Gels
Polyacrylamide or agarose
slabs: length and width 5–25 cm
thickness 1–2 mm
columns: length 7–10 cm
internal diameter ~5mmApplied field
100 V–2 kV (5–500 V cm-^1 )Heat dissipation
Slow from columns, quicker from slabs,
aided by water coolingRunning buffer
0.05–0.5 M electrolyte providing
conductivity and pH stabilityBuffer additives
Urea, surfactants, complexing agents,
organic solventsSample injection
0.1–1 cm^3 loaded into well in slab or
layered onto top of columnSolute detection
Chromogenic reagent or staining dye e.g.
ninhydrin for amino acids, coomassie
brilliant blue or ponceau S for proteins,
acridine orange for nucleotides including
DNAModes
Horizontal or vertical slab, disk or column
SDS –PAGE
Isoelectric focusing
ImmunoelectrophoresisPerformance
Slow with limited resolution, but many
samples run simultaneously, may require
several hoursTubing
Fused-quartz capillary
length 25–75 cm
internal diameter 20–100mmApplied field
10–50 kV (up to 500 V cm-^1 )Heat dissipation
Rapid due to high surface area to volume
ratio, aided by air coolingRunning buffer
As for classical gelBuffer additives
Urea, surfactants, inorganic salts, organic
solvents, sulfonic acids, chiral
cyclodextrins, aminesSample injection
1–50 nl by hydrodynamic or electrokinetic
methodSolute detection
Similar to HPLC detectors,
UV absorbance and fluorescence the most
common, see Table 3Modes
Capillary zone electrophoresis (CZE)
Micellar electrokinetic chromatography
(MEKC)
Capillary gel electrophoresis (CGE)
Capillary isoelectric focusing (CIEF)Performance
Very high efficiency, resolution and
sensitivity, moderately fast, 5 min to about
1h