Cell - 8 September 2016

Overlap searc

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file://O:/Yangnan/Microarray/MASTA/Overlap_Analyfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X10_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X9_vs_X336.txt sis/Wed_Feb_11_102008_2015/Overlaps/X11_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10

2008_2015/Overlaps/X15_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200

8_2015/Overlaps/X26_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102 file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X35_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X30_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X80_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X78_vs_X336.txt008_2015/Overlaps/X72_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X81_vs_X336.txt s/Wed_Feb_11_102008_2015/Overlaps/X84_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analys file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X90_vs_X336.txt is/Wed_Feb_11_102008_2015/Overlaps/X114_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysisfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X116_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/O/Wed_Feb_11_102008_2015/Overlaps/X118_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X122_vs_X336.txtverlaps/X120_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_

2015/Overlaps/X124_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ov file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X129_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X125_vs_X336.txt

erlaps/X142_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Over

laps/X154_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Ffile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X156_vs_X336.txt

eb_11_102008_2015/Overlaps/X158_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X169_vs_X336.txt

2008_2015/Overlaps/X172_vs_X336.txt erlap_Analysis/Wed_Feb_11_102008_2015/Ofile://O:/Yangnan/Microarray/MASTA/Ov is/Wed_Feb_11_102008_2015/Overlaps/X191_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analyss/Wed_Feb_11_102008_2015/Overlaps/X189_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysi/Wed_Feb_11_102008_2015/Overlaps/X187_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X185_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysisfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X176_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X174_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X218_vs_X336.txtverlaps/X204_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X232_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X220_vs_X336.txt

Overlaps/X236_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200

8_2015/Overlaps/X254_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/O

verlaps/X256_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/O verlaps/X3 file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X292_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X269_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X268_vs_X336.txt

06_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ov

erlaps/X314_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/O

verlaps/X316_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ofile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X324_vs_X336.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X320_vs_X336.txt

verlaps/X330_vs_X336.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X334_vs_X336.txt s/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X338.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10

file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ov2008_2015/Overlaps/X336_vs_X340.txt

erlaps/X336_vs_X342.txt file://O:/Yangnan/Microarrafile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X344.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X355.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X353.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X348.txty/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X346.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X362.txt

_2015/Overlaps/X336_vs_X363.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10

file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X374.txt2008_2015/Overlaps/X336_vs_X366.txt

_2015/Overlaps/X336_vs_X377.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200 8_2015/Overlaps/X336_vs_X387.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X386.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X382.txt

008_2015/Overlaps/X336_vs_X394.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ov file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X400.txterlaps/X336_vs_X396.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X404.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X401.txt

s/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X405.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X407.txt s/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X409.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008

_2015/Overlaps/X336_vs_X412.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200 file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X424.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X422.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008 _2015/Overlaps/X336_vs_X420.txt8_2015/Overlaps/X336_vs_X414.txt file://O:/Yangnan/Microarray/MASTA/file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X430.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X428.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X440.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X438.txtOverlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X436.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008 file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X444.txt_2015/Overlaps/X336_vs_X442.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X446.txt

file://O:/Yangnan/Microarray/MASs/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X454.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X462.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X460.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X458.txtTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X456.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ov

erlaps/X336_vs_X464.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysisfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X466.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X470.txt/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X468.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X472.txt

_2015/Overlaps/X336_vs_X474.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/O

verlaps/X336_vs_X476.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ofile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X489.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X487.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X482.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X478.txt

verlaps/X336_vs_X491.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008

_2015/Overlaps/X336_vs_X496.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X500.txt

file://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X502.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X508.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X506.txts/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X504.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/

Overlaps/X336_vs_X513.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X532.txt

file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X556.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X554.txt 8_2015/Overlaps/X336_vs_X534.txt

102008_2015/Overlaps/X336_vs_X558.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Ov

erlaps/X336_vs_X560.txt Overlap_Analysis/Wed_Feb_11_102008file://O:/Yangnan/Microarray/MASTA/file://O:/Yangnan/Microarray/MASTA_2015/Overlaps/X336_vs_X566.txted_Feb_11_102008/Overlap_Analysis/Wsis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X564.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analyy/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X562.txtfile://O:/Yangnan/Microarra _2015/Overlaps/X336_vs_X568.txt file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_1020file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X336_vs_X572.txt

8_2015/Overlaps/X336_vs_X575.txt

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file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/
/Wed_Feb_11_102008_2015/Overlaps/X13_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis8_2015/Overlaps/X11_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X10_vs_X335.txtfile://O:/Yangnan/Microarray/MAST2008_2015/Overlaps/X7_vs_X335.txtA/Overlap_Analysis/Wed_Feb_11_10Overlaps/X3_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015
/Overlaps/X15_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X19_vs_X335.txtOverlaps/X17_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_10200
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysifile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X29_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X28_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X23_vs_X335.txt8_2015/Overlaps/X21_vs_X335.txt
s/Wed_Feb_11_102008_2015/Overlaps/X31_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X33_vs_X335.txt
008_2015/Overlaps/X35_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/O
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X39_vs_X335.txtverlaps/X37_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysisfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X41_vs_X335.txt
/Wed_Feb_11_102008_2015/Overlaps/X43_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X49_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X48_vs_X335.txt
Overlaps/X83_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/file://O:/Yangnan/Microarray/MASTA/Overlap_Analysi/Wed_Feb_11_102008_2015/Overlaps/X78_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysiss/Wed_Feb_11_102008_2015/Overlaps/X79_vs_X335.txts/Wed_Feb_11_102008_2015/Ofile://O:/Yangnan/Microarray/MASTA/Overlap_Analysiverlaps/X75_vs_X335.txt102008_2015/Overlaps/X73_vs_X335.txt/Overlap_Analysis/Wed_Feb_11_file://O:/Yangnan/Microarray/MASTAfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X72_vs_X335.txt/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X71_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA08_2015/Overlaps/X65_vs_X335.txtOverlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X66_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_1020Overlaps/X63_vs_X335.txt/Wed_Feb_11_10200 8_2015/file://O:/Yangnan/Microarray/MASTA/Overlap_Analysisfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X61_vs_X335.txt/Wed_Feb_11_102008_2015/Overlaps/X59_vs_X335.txt
file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X93_vs_X335.txtfile://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X91_vs_X335.txt
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file://O:/Yangnan/Microarray/MASTA/Overlap_Analysis/Wed_Feb_11_102008_2015/Overlaps/X335_vs_X576.txtverlaps/X335_vs_X573.txt^18
14231912121010
29
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(^242326)
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(^2021354128)
13
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(^242226)
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(^2940)
29112217131812161712141113221516282819
453033
(^1111182417)
31
19131412161417131012
47422938
3225321014302021152016192120101313151615182319
343435
15
(^1928)
X335 Downregulated EXP Upregulated X336^10171214
Over
Cold Salt
S P IN H E C
citomsO ABA
A
B
C
05- 0 05 001
02030
PC2 (5.8%)
Control (dex)
CPR5-C (mock)
Control (mock)
CPR5-C (dex)
10
-20
-10
-30
52- 52 57
Transcriptome PCA
PC1 (88.5%)
Enriched
cis-element p-value
Top GSEA coupling-
phase match
FDR
Up Down
ABRE
CBF3 binding
G-box motif
<10e-10
<10e-10
<10e-10
Dehydration (65% RWC)a
Cold stress (0 ºC)d
Autoactive PHYB (YHB)b
2.90e-93
3.02e-38
4.02e-88
High irradiance (CRY1-dep.)c 1.95e-67 Z-box motif <10e-7
D
Repressed auxin responsesf
8.10e-30
9.23e-28
2.71e-60
3.57e-13
1.82e-111
7.91e-27
2.30e-06
4.56e-50
<10e-10
AuxRE 7.8e-05
E
DELLA target gene (rga-Δ17)e GA-down motif
F Dehydration responses
DELLA targets
sesnopse
rn
ixu
a
de
sser
peR
Light responses
Cold responses
0
200
up
down
200
Control
CPR5-C
dexCPR5-C
Control
++

p-value
logFC
-4.4
4.4
3e-08 1e-02
02153106
Dist. Measure
NLP network regulators
Abscisic Acid
Cytochromes
Cytochromes
Auxin
DEGs determined by ANOVA
G
Native Condition CPR5-C OE
ER
NP
CPR5-C
CPR5
NP
Pathogens
Figure 3. Transient Interference with CPR5 Function Simultaneously Activates Diverse Nuclear Signaling Pathways
(A) A proposed cellular mechanism for transient interference of CPR5 function by overexpression (OE) of CPR5-C. NP, nuclear pore.
(B) Principal component analysis (PCA) of transcriptome changes induced by transient expression of CPR5-C.
(C) Heatmap of differentially expressed genes (DEGs) that depend onCPR5-Ctransgene induction (p value < 0.01). Genes with fold change (dex versus mock)
higher than two were subject to natural language processing (NLP)-based network regulator discovery analysis. Major network regulators are highlighted with red
arrows.
(D) Comparative analysis of CPR5-C-mediated CPR5 interference data with 287 publishedArabidopsismicroarrays. Each row represents an analysis with a
specific array dataset, and datasets are sub-categorized into sections according to treatments. Section code: S, stress; P, pathogen; N, nutrient; I, inhibitor;
H, hormone; E, elicitor; C, chemical. The length of each bar represents the number of overlapping DEGs (up- or downregulated) between the CPR5-C data and a
specific treatment.
(E) Gene set enrichment analysis (GSEA). CPR5-C-induced up- and downregulated genes were used as separate inputs for GSEA and non-redundant top
matches are listed. PubMed IDs for the listed datasets are: a-21050490, b-19529817, c-17478635, d-16214899, e-17933900, and f-19392692.
(legend continued on next page)
1530 Cell 166 , 1526–1538, September 8, 2016

Cell - 8 September 2016

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