Table 17.1
(continued)
LjGEA ID
Description
Replicate
Organ
Type of analysis
Treatment
Genotype
Culture system
Reference
Nodulation
har1_shoot_3w_inocul3
har1 shoot 3winocul3
3
Shoot
Mutant
3-week-olduninoculated roots
—
3
days post-R7Ainoculation
Gifu
—
har5
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
har1_shoot_3w_uninocul
har1 shoot 3wuninocul
2
Shoot
Mutant
3-week-olduninoculated roots
Gifu
—
har8
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nfr1_rootSZ_3w_inocul1
nfr1 rootSZ 3winocul1
3
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
—
1
day post-R7Ainoculation
Gifu
—
nfr1
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nfr1_rootSZ_3w_uninocul
nfr1 rootSZ 3wuninocul
2
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
Gifu
—
nfr1
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nfr5_rootSZ_3w_inocul1
nfr5 rootSZ 3winocul1
2
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
—
1
day post-R7Ainoculation
Gifu
—
nfr5
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nfr5_rootSZ_3w_uninocul
nfr5 rootSZ 3wuninocul1
3
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
—
1
day post-R7Ainoculation
Gifu
—
nfr5
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nin_rootSZ_3w_inocul1
nin rootSZ 3winocul1
3
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
—
1
day post-R7Ainoculation
Gifu
—
nin
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nin_rootSZ_3w_uninocul
nin rootSZ 3wuninocul
3
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
Gifu
—
nin
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nup133_rootSZ_3w_inocul1
nup133 rootSZ 3winocul1
3
Rootsusceptiblezone
Mutant
3-week-olduninoculated roots
—
1
day post-R7Ainoculation
Gifu
- nup133
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
nup133_rootSZ_3w_uninocul
nup133 rootSZ 3wuninocul
3
Rootsusceptiblezone
Mutant
3wk-old uninoculatedroots
Gifu
- nup133
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
sen1_nodule_3w_inocul21
sen1 nodule 3winocul21
3
Nodule
Mutant
3-week-olduninoculated roots
—
21 days post-R7Ainoculation
Gifu
- sen1
Sterilized Leca
Hø
gslund
et al. (
2009
)
Nodulation
sen1_root_3w_uninocul
sen1 root 3wuninocul
3
Root
Mutant
3-week-olduninoculated roots
Gifu
- sen1
Sterilized Leca
Hø
gslund
et al. (
2009
)
(continued)
17 A Tutorial onLotus japonicusTranscriptomic Tools 189