The Lotus japonicus Genome

(Steven Felgate) #1
Table 17.1

(continued)

LjGEA ID

Description

Replicate

Organ

Type of analysis

Treatment

Genotype

Culture system

Reference

Nodulation

har1_shoot_3w_inocul3

har1 shoot 3winocul3

3

Shoot

Mutant

3-week-olduninoculated roots


3

days post-R7Ainoculation

Gifu


har5

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

har1_shoot_3w_uninocul

har1 shoot 3wuninocul

2

Shoot

Mutant

3-week-olduninoculated roots

Gifu


har8

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nfr1_rootSZ_3w_inocul1

nfr1 rootSZ 3winocul1

3

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots


1

day post-R7Ainoculation

Gifu


nfr1

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nfr1_rootSZ_3w_uninocul

nfr1 rootSZ 3wuninocul

2

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots

Gifu


nfr1

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nfr5_rootSZ_3w_inocul1

nfr5 rootSZ 3winocul1

2

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots


1

day post-R7Ainoculation

Gifu


nfr5

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nfr5_rootSZ_3w_uninocul

nfr5 rootSZ 3wuninocul1

3

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots


1

day post-R7Ainoculation

Gifu


nfr5

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nin_rootSZ_3w_inocul1

nin rootSZ 3winocul1

3

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots


1

day post-R7Ainoculation

Gifu


nin

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nin_rootSZ_3w_uninocul

nin rootSZ 3wuninocul

3

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots

Gifu


nin

Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nup133_rootSZ_3w_inocul1

nup133 rootSZ 3winocul1

3

Rootsusceptiblezone

Mutant

3-week-olduninoculated roots


1

day post-R7Ainoculation

Gifu


  • nup133


Sterilized Leca


gslund
et al. (

2009

)

Nodulation

nup133_rootSZ_3w_uninocul

nup133 rootSZ 3wuninocul

3

Rootsusceptiblezone

Mutant

3wk-old uninoculatedroots

Gifu


  • nup133


Sterilized Leca


gslund
et al. (

2009

)

Nodulation

sen1_nodule_3w_inocul21

sen1 nodule 3winocul21

3

Nodule

Mutant

3-week-olduninoculated roots


21 days post-R7Ainoculation

Gifu


  • sen1


Sterilized Leca


gslund
et al. (

2009

)

Nodulation

sen1_root_3w_uninocul

sen1 root 3wuninocul

3

Root

Mutant

3-week-olduninoculated roots

Gifu


  • sen1


Sterilized Leca


gslund
et al. (

2009

)

(continued)

17 A Tutorial onLotus japonicusTranscriptomic Tools 189

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