The Lotus japonicus Genome

(Steven Felgate) #1

distributed as gff3 format for release of versions
2.5 and 1.0. As for LjMG recombinant inbred
lines developed by crossing between Miyakojima
MG-20 and Gifu B129, the genotype data in 96
loci (chr 1: 20, chr 2: 15, chr 3: 17, chr 4: 15, chr
5: 15, chr 6: 14) for 205 lines are currently
summarized in an MS-Excelfile (RI_line_geno-
type_140325.xls). These data can be downloaded
from the ftp site (ftp://ftp.kazusa.or.jp/pub/lotus/).


23.3.3.2 Lotus Base
Lotus Base (http://carb.au.dk/lotus-base/) was
initially established by the Centre for Carbohy-
drate Recognition and Signalling (CARB) based
at Aarhus University, Denmark, in 2011, as a
publicly accessible online resource dedicated to
L. japonicusplant lines derived from a single
founder line in which LORE1 was activated
(Madsen et al. 2005 ; Fukai et al. 2012 ; Urbański

Fig. 23.2 Top page of“Clone list.”Users can search the clones by (1) Keyword search or (2) Clone list in each
chromosome


23 Legume andLotus japonicusDatabases 263

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