Nucleic Acids in Chemistry and Biology

(Rick Simeone) #1

or ammonia. The leaving group can be inorganic phosphate, pyrophosphate or AMP, while the displacing
nucleophile can be ammonia, the side chain of glutamine or the -amino group of aspartate (Figure 3.74).
Steps in the biosynthesis of purine nucleotides furnish good examples of a standard control mechanism
in metabolic pathways. This is feedback inhibition, where an enzyme catalysing an early step in the pathway


118 Chapter 3


NH 2
Ribose-5P

Ribose-5P

HN

CO

H 2 C

NH 3

OHCHN

H 2 N N
N

O

Ribose-5P

Ribose-5P

HN

CO

H 2 C

NHCHO

N

N

Ribose-5P

H 2 N

O
H 2 N

Ribose-5P

HN

CNH

H 2 C

NHCHO
N

N

Ribose-5P
H 2 N

CO 2

N

N

Ribose-5P

H 2 N

O
CH HN

H 2 C

COO

OOC

N

HN N
N

O

Ribose-5P

N

N

Ribose-5P

H 2 N

O
O

12 3 4

phosphoribosylamine

glycinamide
ribonucleotide
formylglycinamide
ribonucleotide
formylglycinamidine
ribonucleotide
5-aminoimidazole
ribonucleotide

5

8 7 6

9

inosine 5'-monophosphate (IMP)

5-aminoimidazole-
4-carboxylateribonucleotide
5-aminoimidazole-
4-N-succinocarboxamide
ribonucleotide

5-aminoimidazole
-4-carboxamide
ribonucleotide

5-formamidinoimidazole
-4-carboxamide
ribonucleotide

N^5 , N^10 -methylene
tetrahydrofolate

glutamine

N^10 - formyl
tetrahydrofolate

aspartate

glycine

Figure 3.72 Formation of the purine ring; biosynthesis of IMP


N

N N
N

NH

Ribose-5P

CH

CH 2 COO
OOC

HN
N
H

N

N

O

Ribose-5P

O

HN
N N

N

O

Ribose-5P

N
N N

N

NH 2

Ribose-5P

HN
N N

N

O

Ribose-5P

H 2 N

adenylosuccinate

xanthosine 5'-monophosphate
(XMP)

GMP

GTP
aspartate

oxidation

"NH 3 "

fumarate

IMP

AMP

ATP

Figure 3.73 Formation of AMP and GMP from IMP


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