Systems Biology (Methods in Molecular Biology)

(Tina Sui) #1
The B-Z reaction mechanism, a nonlinear chemical oscillator, serves
as an example for non-equilibrium thermodynamics.
The Brusselator is a simplified theory to model non-equilib-
rium, nonlinear chemical system, developed by Ilya Prigogine and
colleagues in Brussels that has been shown to reproduce the
dynamics of B-Z reactions. Although the Brusselator (named after
combining Brussels and Oscillator) considers six species in its four
chemical reactions, the solution is given only for two autocatalytic
species that can produce limit-cycle oscillations. The remaining
four species act as regulators for the self-organizing behavior.
To illustrate the six-species Brusselator:

A!

k 1
X 1

2 X 1 þX 2!

k 2
3 X 1

BþX 1!
k 3
X 2 þC

Fig. 6Belousov–Zhabotinsky (BZ) reaction dynamics. (a) The oscillations of BZ species after the induction
period, adapted from [24]. (b) BZ reaction in 2-D petri dish (left) and similar pattern found onDictyostelium
discoideum, adapted from [25]. Copyright (2006) National Academy of Sciences, U.S.A.


Complex Biological Responses Using Simple Models 183
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