Systems Biology (Methods in Molecular Biology)

(Tina Sui) #1
multiplied CCD camera. Biophys J
95:5385–5398


  1. Di Rienzo C, Gratton E, Beltram F et al (2013)
    Fast spatiotemporal correlation spectroscopy
    to determine protein lateral diffusion laws in
    live cell membranes. Proc Natl Acad Sci U S A
    110:12307–12312

  2. Schwille P, Haupts U, Maiti S et al (1999)
    Molecular dynamics in living cells observed by
    fluorescence correlation spectroscopy with
    one- and two-photon excitation. Biophys J
    77:2251–2265

  3. Weiss M, Hashimoto H, Nilsson T (2003)
    Anomalous protein diffusion in living cells as
    seen by fluorescence correlation spectroscopy.
    Biophys J 84:4043–4052

  4. Wawrezinieck L, Rigneault H, Marguet D et al
    (2005) Fluorescence correlation spectroscopy
    diffusion laws to probe the submicron cell
    membrane organization. Biophys J
    89:4029–4042

  5. Lenne PF, Wawrezinieck L, Conchonaud F
    et al (2006) Dynamic molecular confinement
    in the plasma membrane by microdomains and
    the cytoskeleton meshwork. EMBO J
    25:3245–3256

  6. Hell SW, Wichmann J (1994) Breaking the
    diffraction resolution limit by stimulated emis-
    sion: stimulated-emission-depletion fluores-
    cence microscopy. Opt Lett 19:780–782

  7. Eggeling C, Ringemann C, Medda R et al
    (2009) Direct observation of the nanoscale
    dynamics of membrane lipids in a living cell.
    Nature 457:1159–1162

  8. Mueller V, Ringemann C, Honigmann A et al
    (2011) STED nanoscopy reveals molecular
    details of cholesterol- and cytoskeleton-
    modulated lipid interactions in living cells. Bio-
    phys J 101:1651–1660

  9. Sezgin E, Levental I, Grzybek M et al (2012)
    Partitioning, diffusion, and ligand binding of
    raft lipid analogs in model and cellular plasma
    membranes. Biochim Biophys Acta
    1818:1777–1784

  10. Hebert B, Costantino S, Wiseman PW (2005)
    Spatiotemporal image correlation spectroscopy
    (STICS) theory, verification, and application to


protein velocity mapping in living CHO cells.
Biophys J 88:3601–3614


  1. Sako Y, Kusumi A (1995) Barriers for lateral
    diffusion of transferrin receptor in the plasma
    membrane as characterized by receptor drag-
    ging by laser tweezers: fence versus tether. J
    Cell Biol 129:1559–1574

  2. Sako Y, Kusumi A (1994) Compartmentalized
    structure of the plasma membrane for receptor
    movements as revealed by a nanometer-level
    motion analysis. J Cell Biol 125:1251–1264

  3. Di Rienzo C, Gratton E, Beltram F et al (2014)
    From fast fluorescence imaging to molecular
    diffusion law on live cell membranes in a com-
    mercial microscope. J Vis Exp 9:e51994

  4. Ries J, Chiantia S, Schwille P (2009) Accurate
    determination of membrane dynamics with
    line-scan FCS. Biophys J 96:1999–2008

  5. Ritchie K, Shan XY, Kondo J et al (2005)
    Detection of non-Brownian diffusion in the
    cell membrane in single molecule tracking.
    Biophys J 88:2266–2277

  6. Di Rienzo C, Gratton E, Beltram F et al (2016)
    Spatiotemporal fluctuation analysis: a powerful
    tool for the future nanoscopy of molecular
    processes. Biophys J 111:679–685

  7. Kolin DL, Wiseman PW (2007) Advances in
    image correlation spectroscopy: measuring
    number densities, aggregation states, and
    dynamics of fluorescently labeled macromole-
    cules in cells. Cell Biochem Biophys
    49:141–164

  8. Digman MA, Brown CM, Sengupta P et al
    (2005) Measuring fast dynamics in solutions
    and cells with a laser scanning microscope. Bio-
    phys J 89:1317–1327

  9. Di Rienzo C, Gratton E, Beltram F et al (2016)
    Super-resolution in a standard microscope:
    from fast fluorescence imaging to molecular
    diffusion laws in live cells. In: Alberto D, AMJ
    v Z (eds) Super-resolution imaging in biomed-
    icine. Taylor & Francis Group, Abingdon, pp
    19–47

  10. Di Rienzo C, Piazza V, Gratton E et al (2014)
    Probing short-range protein Brownian motion
    in the cytoplasm of living cells. Nat Commun
    5:5891


290 Francesco Cardarelli

Free download pdf