Systems Biology (Methods in Molecular Biology)

(Tina Sui) #1
image will enable extracting the information with modules
settings underneath.
Now, we need to add the modules to use our pipeline. When
the modules are selected through the settings, we can run the
pipeline and model the output at every step through the
embedded execution functions (Fig.10, 11, and12).

Fig. 8ImageJ screenshot of the analysis and measurement of the nuclei. The confocal image is selected to
adjust the threshold parameters to count the nuclei in the image. The nuclei contain information on
cytoskeleton experiment. All nuclei areredincolorhas been applied threshold. The particles were analyzed
from the in-built functions to allow the calculation and identification of the cells


356 Garima Verma et al.

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