Caspases,Paracaspases, and Metacaspases Methods and Protocols

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  1. Place the cassette into electrode assembly and fi ll the tank with
    cold transfer buffer.

  2. Connect the electrophoresis unit to the power supply and
    make sure that the direction of transfer is correct.

  3. Perform the transfer at a constant 100 V for 2 h (alternatively,
    120 V for 1.5 h) at 4 °C. Transfer effi ciency is indicated by
    transfer of prestained SDS-PAGE markers ( see Note 23 ).

  4. Transfer the membrane into blocking solution. Incubate at
    least 1 h on a rocker.

  5. Rinse the membrane several times in PBS.

  6. Put the membrane into a small plastic container ( see Note 24 ).
    Add the diluted primary antibody of interest (usually from
    1:500 to 1:5,000 in diluent solution). Incubate overnight on a
    rocker at 4 °C ( see Note 25 ).

  7. Wash three times (10 min in PBS, 15 min in PBS-T, 10 min in
    PBS) on a rocker.

  8. Add peroxidase-conjugated secondary antibody diluted in
    blocking buffer (usually 1:5,000 to 1:10,000). Incubate for
    1 h on a rocker.

  9. Wash as in step 4.

  10. Develop membrane with ECL according to the manufacturer’s
    instructions.

  11. Remove excess PBS and wrap the membrane in plastic foil.
    Expose the membrane to X-ray fi lm in a developing cassette.
    Bands corresponding to zymogen and processed caspases are
    normally detected within 1–10 min of exposure ( see Notes 26
    and 27 ).

  12. Process the fi lm in an automatic X-ray developer.

  13. Before reprobing the membrane using other primary antibodies,
    incubate the membrane in stripping buffer for 30 min at 50 °C
    with agitation ( see Notes 28 – 30 ).

  14. Wash the membrane extensively with water and repeat steps 1 – 9.

  15. Place coverslips in 6-well or 12-well culture plates.

  16. Seed cells and allow them to attach to the glass surface ( see
    Notes 31 and 32 ).

  17. Induce apoptosis in cells by desired way. Concurrently incu-
    bate a control culture without induction.

  18. Aspirate cell culture medium and rinse cells twice in cold PBS.

  19. After the last wash, cover cells with 4 % cold formaldehyde and
    incubate the samples at 4 °C for 15–30 min.

  20. Wash the fi xed cells 3× 5 min in PBS ( see Note 33 ).


3.1.4 Immunodetection


3.2 Immuno-
cytochemical
Detection of Active
Caspases


3.2.1 Sample
Preparation


Magnus Olsson and Boris Zhivotovsky

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