Caspases,Paracaspases, and Metacaspases Methods and Protocols

(Wang) #1

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series of fractions containing full-length caspase-8-YFP (~84 kDa)
and main contaminants eluting prior to the pool of caspase. DEAE
anion exchange chromatography (Fig. 3b), in addition to
concentrating the caspase, allows for the removal of more impuri-
ties. Following refolding, the typical emission spectrum of YFP is
recovered (Fig. 3c), along with enzymatic activity (Fig. 3d).
The following protocols are valid for bacterial cultures of
1–2 L and can be easily scaled up.

The expression protocol is based on the general procedure
described in Subheading 3.1.1 with the modification that caspase-8
expression induction is performed using 0.4 mM IPTG at 37 °C
for 5 h (step 5, Subheading 3.1.1.1) (DAYS 1–3).


  1. If frozen, thaw the bacterial suspension in tepid water. Do not
    let the suspension warm. Transfer the cell suspension into a
    50–100 mL plastic beaker. Keep on ice (DAY 4).

  2. Using an ultrasonic homogenizer (large probe), break cells for
    2 min at 70 % power with 50 % duty cycle (on for 0.5 s, then
    off for 0.5 s). Keep on ice.

  3. Transfer the lysate to centrifuge tubes and centrifuge at 4 °C
    for 30 min at 18,000 × g (12,000 rpm in a Sorvall SM-34 rotor
    or equivalent). Discard the supernatant. The insoluble pellet
    contains the caspase.

  4. Suspend the inclusion body pellet in 10–20 mL of guanidine
    buffer. Transfer to a small plastic beaker and stir overnight at
    room temperature to solubilize the proteins. Keep everything
    at room temperature from this step forward (see Note 16).

  5. The next morning, centrifuge the solubilized proteins for
    30 min at 18,000 × g (12,000 rpm in a Sorvall SM-34 rotor or
    equivalent) to eliminate remaining insoluble debris. The super-
    natant contains the solubilized caspase (DAY 5).

  6. Prepare the Chelating Sepharose as described in
    Subheading 3.1.1.2, step 4, but equilibrate the column with 5
    bed volumes of guanidine buffer. Allow 2 mL of resin to purify
    from 1 L of bacterial expression.

  7. Resuspend the prepared resin with the supernatant from step
    5 in a 15–50 mL tube. Incubate with gentle shaking for ~2 h.

  8. Recover the resin by centrifugation for 5 min at 800 × g.

  9. Wash the resin twice with 10 bed volumes of urea buffer and
    recover the resin by centrifugation, as in step 8.

  10. Transfer the resin into a 15 mL tube. Elute the caspase with a
    step gradient of imidazole in urea buffer (0–200 mM imidaz-
    ole; 12 fractions; 1 bed volume per fraction) by suspending the
    resin in buffer then by centrifugation for 5 min at 800 × g.


Full-Length Caspase-8
Expression Protocol


Full-Length Caspase-8
Purification Protocol


Dave Boucher et al.

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