AMPK Methods and Protocols

(Rick Simeone) #1
container. Add 1.2 g of tris(hydroxymethyl)aminomethane and
190 mg of EGTA. Mix and adjust pH to 7.2 with HCl. Make
up to 500 ml with mQ water and store at 4C (weeks) or
 20 C (months). On the day of use, add 500μl of bovine
serum albumin solution (final concentration of 0.15% BSA)
and 25μl of inorganic phosphate 1 M (final concentration of
5mMPi-Tris) for 50 ml of KCl buffer.


  1. XF assay medium. Add 0.5 ml ofD-glucose 1 M to 49.5 ml of
    M199 medium.

  2. 5% FCS (v/v)/XF assay medium. Add 0.5 ml ofD-glucose 1 M
    and 2.5 ml of heat-inactivated FCS to 47 ml of M199 medium.

  3. Ethanol: 70% (v/v). Add 700 ml of ethanol absolute in a glass
    cylinder and complete to 1 L with mQ water.

  4. Ethanol: 30% (v/v). Add 300 ml of ethanol absolute in a glass
    cylinder and complete to 1 L with mQ water.


2.4 Substrates
and Inhibitors



  1. Tris-buffer: 50 mM Tris. Add ~50 ml of mQ water to a glass
    beaker containing a magnet. Weigh 605.7 mg of Tris. Mix and
    adjust pH to 7.4 with HCl 1 N. Make up to 100 ml with mQ
    water, aliquot and store at 20 C.

  2. Glutamate/malate: 0.5 M glutamate/0.25 M malate. Dissolve
    422.7 mg ofL-glutamic acid sodium salt and 222.6 mg ofL-
    malic acid disodium salt in 5 ml of Tris-buffer 50 mM. Aliquot
    (250μl) in 0.5-ml tubes and store at 20 C.

  3. Succinate/malate: 0.5 M succinate/0.25 M malate. Dissolve
    675 mg of succinate disodium salt hexahydrate and 222.6 mg
    ofL-malic acid disodium salt in 5 ml of Tris-buffer 50 mM.
    Aliquot (250μl) in 0.5 ml tubes and store at 20 C.

  4. Malate: 0.25 M malate. Dissolve 222.6 mg ofL-malic acid
    disodium salt in 5 ml of Tris-buffer 50 mM. Aliquot (250μl)
    in 0.5 ml tubes and store at 20 C.

  5. Palmitoyl-DL-carnitine: 20 mM palmitoyl-DL-carnitine. Dis-
    solve 43.6 mg of palmitoyl-DL-carnitine chloride in 5 ml of
    mQ water. Aliquot (250μl) in 0.5 ml tubes and store at
     20 C.

  6. Rotenone: 2 mM rotenone. Dissolve 3.95 mg of rotenone in
    5 ml of ethanol absolute. Aliquot (100μl) in 0.5 ml tubes and
    store at 20 C.

  7. ADP: 100 mM ADP. Dissolve 213.6 mg of adenosine 5-


(^0) -diphosphate sodium salt in 5 ml of Tris-buffer 50 mM. Ali-
quot (200μl) in 0.5 ml tubes and store at 20 C.



  1. Oligomycin: 1 mg/ml oligomycin. Dissolve 2 mg of oligomy-
    cin in 2 ml of DMSO. Aliquot (100μl) in 0.5 ml tubes and
    store at 20 C.


Methods for Assessing Mitochondrial OXPHOS 277
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