AMPK Methods and Protocols

(Rick Simeone) #1

2 Materials


2.1 Analysis of AMPK
Activation in Cells
or Mice



  1. Glucose-free DMEM: glucose-free Dulbecco’s Modified
    Eagle’s Medium (DMEM), 10% (v/v) fetal bovine serum
    (FBS) (seeNote 1).

  2. Complete DMEM medium: DMEM medium (containing
    25 mM glucose), 10% (v/v) FBS.

  3. Phosphate-buffered saline (PBS): 137 mM NaCl, 2.68 mM
    KCl, 10 mM Na 2 HPO 4 , 1.76 mM KH 2 PO 4 , pH 7.4. Store
    at room temperature (RT).
    4.AXIN/,LAMTOR1/MEFs, and the control wild-type
    MEFs (seeNotes 2and 3 ).

  4. Male mice (C57BL/6 J) at 4–6 weeks old. The mice are housed
    individually (seeNote 4) for at least 24 h prior to the experi-
    ment, with free access to water and standard diet (65% carbo-
    hydrate, 11% fat, 24% protein). The light-dark cycle for mice is
    from 8 a.m. to 8 p.m.

  5. Lysis buffer: 20 mM Tris–HCl, pH 7.5, 150 mM NaCl, 1 mM
    EDTA, 1 mM EGTA, 1% (v/v) Triton X-100, 2.5 mM sodium
    pyrophosphate, 1 mM β-glycerophosphate, with protease
    inhibitor cocktail. Store at 4C(seeNote 5).

  6. 2SDS sample buffer: 125 mM Tris–HCl, pH 6.8, 4% (w/v)
    SDS, 20% (v/v) glycerol, 100 mM DTT, 0.02% (w/v) bromo-
    phenol blue. Store at RT.

  7. 8% SDS-PAGE gel.

  8. Vertical “wet” transfer apparatus (seeNote 6).

  9. Blocking solution: TBS (1Tris-buffered saline): 50 mM
    Tris–HCl, PH 7.5, 150 mM NaCl, 0.01% Tween-20, 5%
    (w/v) nonfat dry milk or bovine serum albumin (BSA).

  10. Antibodies: anti-phospho-AMPKα-Thr-172, anti-AMPKα,
    anti-phospho-ACC-Ser79, and anti-ACC (seeNote 7).

  11. Sonicator equipped with a 5/64^00 (2 mm) stepped microtip.

  12. Electrical disperser (seeNote 8).

  13. Tabletop centrifuge.


2.2 Analysis
of Lysosomal
Localization of AXIN



  1. Lysosome Isolation Kit (Sigma, cat. LYSISO1) (seeNote 9),
    containing 5 Extraction Buffer, 20 OptiPrep Dilution
    Buffer, OptiPrep Density Gradient Medium, 2.5 M CaCl 2
    solution, and 2.3 M sucrose solution. Store at 4C.

  2. 7-mL Dounce Glass Tissue Grinder with small clearance pestle.
    The grinder should be precooled to 4C prior to use.

  3. Ultracentrifuge equipped with SW60 Ti rotor. The rotor
    should be precooled to 4C prior to use.


396 Chen-Song Zhang et al.

Free download pdf