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6 1 Hierarchies and Relationships attributes can appear in any order, and an attribute that is not needed by an element is not w ...

1.3 Hierarchical Organization 7 It is also used to show where an element ends. To include the left angle bracket in ordinary tex ...

8 1 Hierarchies and Relationships constantly categorizing objects, experiences, and people. We do it effortlessly and unconsciou ...

1.3 Hierarchical Organization 9 represented using the Biopolymer Markup Language (BioML) (BioML 2003). This XML document consist ...

10 1 Hierarchies and Relationships Classifications are frequently organized in the form of a hierarchy. XML elements are hierar ...

1.4 Creating and Updating XML 11 Figure 1.4 File management vs. XML document management. The image on the left used the Windows ...

12 1 Hierarchies and Relationships Figure 1.5 Data entry screen for an element of an XML document. The window on the left shows ...

1.4 Creating and Updating XML 13 > <!ELEMENT atom EMPTY> <!ATTLIST atom elementType CDATA #IMPLIED title CDATA #IMPL ...

14 1 Hierarchies and Relationships ’dictRef CDATA #IMPLIED’> <!ELEMENT molecule (atomArray, bondArray)> <!ATTLIST mo ...

1.4 Creating and Updating XML 15 <!ENTITY % dtd1 SYSTEM "ml.dtd"> To include the contents of the fileml.dtd, one uses%dtd1 ...

16 1 Hierarchies and Relationships attribute’s value. When an attribute has only a limited list of possible values, then one cho ...

1.5 The Meaning of a Hierarchy 17 The hierarchical structure of an XML document is manipulated by open- ing and closing each ele ...

18 1 Hierarchies and Relationships Figure 1.9 Adding a new element to an XML document. Anoteelement has been chosen to be added ...

1.5 The Meaning of a Hierarchy 19 Figure 1.10 Result of adding a new element to an XML document. Anoteelement has been added to ...

20 1 Hierarchies and Relationships File Manager XML Editor A file or directory (folder) name An XML element tag is for uniquely ...

1.5 The Meaning of a Hierarchy 21 Figure 1.11 Chemical hierarchy (EcoCyc 2003). top-down or bottom-up technique, it is always pr ...

22 1 Hierarchies and Relationships tioned until relatively recently, and is still commonly accepted. By the middle of the ninete ...

1.5 The Meaning of a Hierarchy 23 Figure 1.12 Some gene families. The first row belowGenein this classification con- sists of su ...

24 1 Hierarchies and Relationships Figure 1.13 The human nuclear receptor gene superfamily. A common ancestor evolved into the t ...

1.6 Relationships 25 1.6 Relationships Of course, most titles are like this, and the abstract quickly clears up the confusion. H ...