References
AGAVE, 2002. The Architecture for Genomic Annotation, Visualization and Ex-
change.www.animorphics.net/lifesci.html.
Al-Shahrour, F., R. Diaz-Uriarte, and J. Dopazo. 2004. FatiGO: a web tool for finding
significant associations of Gene Ontology terms with groups of genes.Bioinformat-
ics20:578–580.
Altschul, S.F. 1991. Amino acid substitution matrices from an information theoretic
perspective.J. Mol. Biol.219:555–565.
Altschul, S.F., and W. Gish. 1996. Local alignment statistics.Methods Enzymol.266:
460–480.
Altschul, S.F., W. Gish, W. Miller, E.W. Myers, and D.J. Lipman. 1990. Basic local
alignment search tool.J. Mol. Biol.215:403–410.
Altschul, S.F., T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lip-
man. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs.Nucleic Acids Res.25:3389–3402.
Andreeva, A., D. Howorth, S.E. Brenner, T.J. Hubbard, C. Chothia, and A.G. Murzin.
- SCOP database in 2004: refinements integrate structure and sequence family
data.Nucleic Acids Res.32:D226–D229. Database issue.
Aronson, A.R. 2001. Effective mapping of biomedical text to the UMLS Metathe-
saurus: the MetaMap program. InProc. AMIA Symp., pp. 17–21.
Asimov, I. 1964.A Short History of Biology. London: Thomas Nelson & Sons.
Attwood, T.K., P. Bradley, D.R. Flower, A. Gaulton, N. Maudling, A.L. Mitchell,
G. Moulton, A. Nordle, K. Paine, P. Taylor, A. Uddin, and C. Zygouri. 2003. PRINTS
and its automatic supplement, prePRINTS.Nucleic Acids Res.31:400–402.
Attwood, T.K., D.R. Flower, A.P. Lewis, J.E. Mabey, S.R. Morgan, P. Scordis, J.N. Selley,
and W. Wright. 1999. PRINTS prepares for the new millennium.Nucleic Acids Res.
27:220–225.