References 395
Berman, H.M., T.N. Bhat, P.E. Bourne, Z. Feng, G. Gilliland, H. Weissig, and J. West-
brook. 2000. The Protein Data Bank and the challenge of structural genomics.Nat.
Struct. Biol.7:957–959.
Berman, H.M., W.K. Olson, D.L. Beveridge, J. Westbrook, A. Gelbin, T. Demeny, S.H.
Hsieh, A.R. Srinivasan, and B. Schneider. 1992. The nucleic acid database. A com-
prehensive relational database of three-dimensional structures of nucleic acids.Bio-
phys. J.63:751–759.
Berners-Lee, T., 2000a. Semantic Web - XML2000. http://www.w3.org/2000/Talks/
1206-xml2k-tbl.
Berners-Lee, T., 2000b. Why RDF model is different from the XML model.www.w3.
org/DesignIssues/RDF-XML.html.
BioML, 2003. Biopolymer Markup Language website. http://www.rdcormia.com/
COIN78/files/XML_Finals/BIOML/Pages/BIOML.htm.
Birney, E., T.D. Andrews, P. Bevan, M. Caccamo, Y. Chen, L. Clarke, G. Coates,
J. Cuff, V. Curwen, T. Cutts, T. Down, E. Eyras, X.M. Fernandez-Suarez, P. Gane,
B. Gibbins, J. Gilbert, M. Hammond, H.R. Hotz, V. Iyer, K. Jekosch, A. Kahari,
A. Kasprzyk, D. Keefe, S. Keenan, H. Lehvaslaiho, G. McVicker, C. Melsopp,
P. Meidl, E. Mongin, R. Pettett, S. Potter, G. Proctor, M. Rae, S. Searle, G. Slater,
D. Smedley, J. Smith, W. Spooner, A. Stabenau, J. Stalker, R. Storey, A. Ureta-Vidal,
K.C. Woodwark, G. Cameron, R. Durbin, A. Cox, T. Hubbard, and M. Clamp. 2004.
An overview of Ensembl.Genome Res.14:925–928.
Bodenreider, O. 2004. The Unified Medical Language System (UMLS): integrating
biomedical terminology.Nucleic Acids Res.32:D267–D270. Database issue.
Bodenreider, O., S.J. Nelson, W.T. Hole, and H.F. Chang. 1998. Beyond synonymy:
exploiting the UMLS semantics in mapping vocabularies. InProc. AMIA Symp., pp.
815–819.
Brachman, R., and J. Schmolze. 1985. An overview of the KL-ONE knowledge repre-
sentation system.Cognitive Sci9:171–216.
Brazma, A., P. Hingamp, J. Quackenbush, G. Sherlock, P. Spellman, C. Stoeckert,
J. Aach, W. Ansorge, C.A. Ball, H.C. Causton, T. Gaasterland, P. Glenisson, F.C. Hol-
stege, I.F. Kim, V. Markowitz, J.C. Matese, H. Parkinson, A. Robinson, U. Sarkans,
S. Schulze-Kremer, J. Stewart, R. Taylor, J. Vilo, and M. Vingron. 2001. Minimum
information about a microarray experiment (MIAME)–toward standards for mi-
croarray data.Nat. Genet.29:365–371.
Buck, L. 2000. The molecular architecture of odor and pheromone sensing in mam-
mals.Cell100:611–618.
Buck, L., and R. Axel. 1991. A novel multigene family may encode odorant receptors:
a molecular basis for odor recognition.Cell65:175–187.