Synthetic Biology Parts, Devices and Applications

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122 6 Constitutive and Regulated Promoters in Yeast


Definitions


Transcription initiation: Initial steps of transcription until the formation of the
first RNA bond.
Promoter: A DNA sequence enabling and regulating transcription initiation.
Transcription initiation start site (TSS): The first nucleotide of a DNA
sequence to be transcribed into RNA.
Core promoter: Promoter region defining the TSS(s) and the assembly of
the PIC.
Pre‐initiation complex (PIC): Protein complex containing RNA polymerase II
and the general transcription factors that assemble on the core promoter.
Transcription factor: A protein regulating transcription initiation. A transcrip-
tion factor is not a subunit of RNA polymerase II.
Upstream element: Promoter region conferring regulation to transcription
initiation. It contains transcription factor binding sites (TFBSs).
Orthogonal system: A system that is independent of cell physiology.

References


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2 Rose, M., Casadaban, M.J., and Botstein, D. (1981) Yeast genes fused to beta‐
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3 Guarente, L., Yocum, R.R., and Gifford, P. (1982) A GAL10‐CYC1 hybrid yeast
promoter identifies the GAL4 regulatory region as an upstream site. Proc. Natl.
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4 Struhl, K. (1982) The yeast his3 promoter contains at least two distinct elements.
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5 Hitzeman, R.A., Hagie, F.E., Levine, H.L., Goeddel, D.V., Ammerer, G., and Hall,
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6 Ramer, S.W., Elledge, S.J., and Davis, R.W. (1992) Dominant genetics using a yeast
genomic library under the control of a strong inducible promoter. Proc. Natl.
Acad. Sci. U.S.A., 89 (23), 11 589–11 593.
7 McAleer, W.J., Buynak, E.B., Maigetter, R.Z., Wampler, D.E., Miller, W.J., and
Hilleman, M.R. (1984) Human hepatitis B vaccine from recombinant yeast.
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8 Mumberg, D., Müller, R., and Funk, M. (1994) Regulatable promoters of
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heterologous expression. Nucleic Acids Res., 22 (25), 5767–5768.
9 Mumberg, D., Müller, R., and Funk, M. (1995) Yeast vectors for the controlled
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