References 34514 Shetty, R.P., Endy, D., and Knight, T.F. Jr. (2008) Engineering BioBrick vectors
from BioBrick parts. J. Biol. Eng., 2 , 1–12.
15 Shao, Z., Luo, Y., and Zhao, H. (2011) Rapid characterization and engineering
of natural product biosynthetic pathways via DNA assembler. Mol. Biosyst.,
7 , 1056–1059.
16 Kuijpers, N.G., Solis-Escalante, D., Bosman, L., van den Broek, M., Pronk, J.T.
et al. (2013) A versatile, efficient strategy for assembly of multi-fragment
expression vectors in Saccharomyces cerevisiae using 60 bp synthetic
recombination sequences. Microb. Cell Fact., 12 , 47.
17 Engler, C., Gruetzner, R., Kandzia, R., and Marillonnet, S. (2009) Golden gate
shuffling: a one-pot DNA shuffling method based on type IIs restriction
enzymes. PLoS One, 4 , e5553.
18 Werner, S., Engler, C., Weber, E., Gruetzner, R., and Marillonnet, S. (2012)
Fast track assembly of multigene constructs using Golden Gate cloning and the
MoClo system. Bioeng. Bugs, 3 , 38–43.
19 Weber, E., Engler, C., Gruetzner, R., Werner, S., and Marillonnet, S. (2011)
A modular cloning system for standardized assembly of multigene constructs.
PLoS One, 6 , e16765.
20 Knight, T. (2003) Idempotent Vector Design for Standard Assembly of
Biobricks, MIT Synthetic Working Group, http://web.mit.edu/synbio/release/
docs/biobricks.pdf.
21 Canton, B., Labno, A., and Endy, D. (2008) Refinement and standardization of
synthetic biological parts and devices. Nat. Biotechnol., 26 , 787–793.
22 Vick, J.E., Johnson, E.T., Choudhary, S., Bloch, S.E., Lopez-Gallego, F. et al.
(2011) Optimized compatible set of BioBrick vectors for metabolic pathway
engineering. Appl. Microbiol. Biotechnol., 92 , 1275–1286.
23 Lee, T.S., Krupa, R.A., Zhang, F., Hajimorad, M., Holtz, W.J. et al. (2011)
BglBrick vectors and datasheets: a synthetic biology platform for gene
expression. J. Biol. Eng., 5 , 1–12.
24 Anderson, J.C., Dueber, J.E., Leguia, M., Wu, G.C., Goler, J.A. et al. (2010)
BglBricks: a flexible standard for biological part assembly. J. Biol. Eng., 4 , 1–12.
25 Leonard, E., Ajikumar, P.K., Thayer, K., Xiao, W.H., Mo, J.D. et al. (2010)
Combining metabolic and protein engineering of a terpenoid biosynthetic
pathway for overproduction and selectivity control. Proc. Natl. Acad. Sci. U.S.A.,
107 , 13654–13659.
26 Matsushika, A., Watanabe, S., Kodaki, T., Makino, K., Inoue, H. et al. (2008)
Expression of protein engineered NADP+-dependent xylitol dehydrogenase
increases ethanol production from xylose in recombinant Saccharomyces
cerevisiae. Appl. Microbiol. Biotechnol., 81 , 243–255.
27 Nakamura, C.E. and Whited, G.M. (2003) Metabolic engineering for the
microbial production of 1,3-propanediol. Curr. Opin. Biotechnol., 14 , 454–459.
28 Wang, H.H., Isaacs, F.J., Carr, P.A., Sun, Z.Z., Xu, G. et al. (2009) Programming
cells by multiplex genome engineering and accelerated evolution. Nature, 460 ,
894–898.
29 Alper, H., Miyaoku, K., and Stephanopoulos, G. (2005) Construction of
lycopene-overproducing E. coli strains by combining systematic and
combinatorial gene knockout targets. Nat. Biotechnol., 23 , 612–616.