Produce Degradation Pathways and Prevention

(Romina) #1

Genomic Exploration of Produce Degradation 17


Sanchez, D.O., Zandomeni, R.O., Cravero, S., Verdun, R.E., Pierrou, E., Faccio, P., Diaz, G.,
Lanzavecchia, S., Aguero, F., Frasch, A.C.C., Andersson, S.G.E., Rossetti, O.L., Grau,
O., and Ugalde, R.A., Gene discovery through genomic sequencing of Brucella
abortus. Infect. Immun., 69, 865–868, 2001.
Simpson, A.J., Reinach, F.C., Arruda, P., Abreu, F.A., Acencio, M., Alvarenga, R., Alves,
L.M., Araya, J.E., Baia, G.S., Baptista, C.S., Barros, M.H., Bonaccorsi, E.D., Bordin,
S., Bove, J.M., Briones, M.R., Bueno, M.R., Camargo, A.A., Camargo, L.E., Carraro,
D.M., Carrer, H., Colauto, N.B., Colombo, C., Costa, F.F., Costa, M.C., Costa-Neto,
C.M., Coutinho, L.L., Cristofani, M., Dias-Neto, E., Docena, C., El-Dorry, H., Facin-
cani, A.P., Ferreira, A.J., Ferreira, V.C., Ferro, J.A., Fraga, J.S., Franca, S.C., Franco,
M.C., Frohme, M., Furlan, L.R., Garnier, M., Goldman, G.H., Goldman, M.H.,
Gomes, S.L., Gruber, A., Ho, P.L., Hoheisel, J.D., Junqueira, M.L., Kemper, E.L.,
Kitajima, J.P., and Marino, C.L., The genome sequence of the plant pathogen Xylella
fastidiosa, The Xylella fastidiosa Consortium of the Organization for Nucleotide
Sequencing and Analysis, Nature, 406, 151–157, 2000.
Smid, E.J., Jansen, A.H.J., and Gorris, L.G.M., Detection of Erwinia carotovora subsp.
atroseptica and Erwinia chrysanthemi in potato tubers using polymerase chain reac-
tion, Plant Pathol., 44, 1058–1069, 1995.
Starr, M.P. and Chatterjee, A.K., The genus Erwinia: enterobacteria pathogenic to plants and
animals, Annu. Rev. Microbiol., 26, 389–426, 1972.
Straus, D. and Ausubel, F.M., Genomic subtraction for cloning DNA corresponding to deletion
mutations. Proc. Natl. Acad. Sci. USA, 87, 1889–1893, 1990.
Toth, I.K., Avrova, A.O., and Hyman, L.J., Rapid identification and differentiation of the soft
rot erwinias by 16S-23S intergenic transcribed spacer-PCR and restriction fragment
length polymorphism analyses, Appl. Environ. Microbiol., 67, 4070–4076, 2001.
Toth, I.K., Bell, K.S., Holeva, M.C., and Birch, P.R., Soft rot erwiniae: from genes to genomes,
Mol. Plant Pathol., 4, 17–30, 2003.
Toth, I.K., Bertheau, Y., Hyman, L.J., Laplaze, L., Lopez, M.M., McNicol, J., Niepold, F.,
Persson, P., Salmond, G.P., Sletten, A., van Der Wolf, J.M., and Perombelon, M.C.,
1999b. Evaluation of phenotypic and molecular typing techniques for determining
diversity in Erwinia carotovora subspp. atroseptica, J. Appl. Microbiol., 87, 770–781,
1999a.
Toth, I.K., Hyman, L.J., and Wood, J.R., A one step PCR-based method for the detection of
economically important soft rot Erwinia species on micropropagated potato plants,
J. Appl. Microbiol., 87, 158–166, 1999b.
Van Sluys, M.A., de Oliveira, M.C., Monteiro-Vitorello, C.B., Miyaki, C.Y., Furlan, L.R.,
Camargo, L.E., da Silva, A.C., Moon, D.H., Takita, M.A., Lemos, E.G., Machado,
M.A., Ferro, M.I., da Silva, F.R., Goldman, M.H., Goldman, G.H., Lemos, M.V., El-
Dorry, H., Tsai, S.M., Carrer, H., Carraro, D.M., de Oliveira, R.C., Nunes, L.R.,
Siqueira, W.J., Coutinho, L.L., Kimura, E.T., Ferro, E.S., Harakava, R., Kuramae,
E.E., Marino, C.L., Giglioti, E., Abreu, I.L., Alves, L.M., de Amaral, A.M., Baia,
G.S., Blanco, S.R., Brito, M.S., Cannavan, F.S., Celestino, A.V., da Cunha, A.F.,
Fenille, R.C., Ferro, J.A., Formighieri, E.F., Kishi, L.T., Leoni, S.G., Oliveira, A.R.,
Rosa, V.E., Jr., Sassaki, F.T., Sena, J.A., de Souza, A.A., Truffi, D., Tsukumo, F.,
Yanai, G.M., Zaros, L.G., Civerolo, E.L., Simpson, A.J., Almeida, N.F., Jr., Setubal,
J.C., and Kitajima, J.P., Comparative analyses of the complete genome sequences of
Pierce’s disease and citrus variegated chlorosis strains of Xylella fastidiosa, J. Bac-
teriol., 185, 1018–1026, 2003.

Free download pdf