Bovine tuberculosis

(Barry) #1

78 R.A. Skuce et al.


Smith, N.H. and Upton, P. (2012) Naming spoligotype patterns for the RD9-deleted lineage of the Myco-
bacterium tuberculosis complex; http://www.Mbovis.org. Infection, Genetics and Evolution 12(4), 873–876.
Smith, N.H., Dale, J., Inwald, J., Palmer, S., Gordon, S.V., et al. (2003) The population structure of Myco-
bacterium bovis in Great Britain: clonal expansion. Proceedings of the National Academy of Sciences
of the United States of America 100(25), 15271–15275.
Smith, N.H., Kremer, K., Inwald, J., Dale, J., Driscoll, J.R., et al. (2006a) Ecotypes of the Mycobacterium
tuberculosis complex. Journal of Theoretical Biology 239(2), 220–225.
Smith, N.H., Gordon, S.V., de la Rua-Domenech, R., Clifton-Hadley, R.S. and Hewinson, R.G. (2006b)
Bottlenecks and broomsticks: the molecular evolution of Mycobacterium bovis. Nature Reviews Micro-
biology 4(9), 670–681.
Smith, N.H., Berg, S., Dale, J., Allen, A., Rodriguez, S., et al. (2011) European 1: a globally important clonal
complex of Mycobacterium bovis. Infection, Genetics and Evolution 11(6), 1340–1351.
Stone, M.J., Brown, T.J. and Drobniewski, F.A. (2011) Human Mycobacterium bovis infections in London
and southeast England: Table 1. Journal of Clinical Microbiology 50(1), 164–165.
Szewzyk, R., Svenson, S.B., Hoffner, S.E., Bolske, G., Wahlstrom, H., et al. (1995) Molecular epidemiologi-
cal studies of Mycobacterium bovis infections in humans and animals in Sweden. Journal of Clinical
Microbiology 33(12), 3183–3185.
Tang, P. and Gardy, J.L. (2014) Stopping outbreaks with real-time genomic epidemiology. Genome Medi-
cine 6(11), 104.
Thacker, T.C., Palmer, M.V., Robbe-Austerman, S., Stuber, T.P. and Waters, W.R. (2015) Anatomical dis-
tribution of Mycobacterium bovis genotypes in experimentally infected white-tailed deer. Veterinary
Microbiology 180(1–2), 75–81.
Trewby, H., Wright, D., Breadon, E.L., Lycett, S.J., Mallon, T.R., et al. (2016) Use of bacterial whole-genome
sequencing to investigate local persistence and spread in bovine tuberculosis. Epidemics 14, 26–35.
Van Soolingen, D. (2001) Molecular epidemiology of tuberculosis and other mycobacterial infections: main
methodologies and achievements. Journal of Internal Medicine 249(1), 1–26.
Votintseva, A.A., Pankhurst, L.J., Anson, L.W., Morgan, M.R., Gascoyne-Binzi, D., et al. (2015) Mycobacte-
rial DNA extraction for whole-genome sequencing from early positive liquid (MGIT) cultures. Journal
of Clinical Microbiology 53(4), 1137–1143.
Walker, T.M., Monk, P., Smith, E.G. and Peto, T.E. (2013a) Contact investigations for outbreaks of Mycobac-
terium tuberculosis: advances through whole genome sequencing. Clinical Microbiology and Infection
19(9), 796–802.
Walker, T.M., Ip, C.L., Harrell, R.H., Evans, J.T., Kapatai, G., et al. (2013b) Whole-genome sequencing to
delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study. Lancet Infec-
tious Diseases 13(2), 137–146.
Walker, T.M., Lalor, M.K., Broda, A., Saldana Ortega, L., Morgan, M., et al. (2014) Assessment of Myco-
bacterium tuberculosis transmission in Oxfordshire, UK, 2007–12, with whole pathogen genome
sequences: an observational study. The Lancet Respiratory Medicine 2(4), 285–292.
Waters, W.R., Thacker, T.C., Nelson, J.T., DiCarlo, D.M., Maggioli, M.F., et al. (2014) Virulence of two strains
of Mycobacterium bovis in cattle following aerosol infection. Journal of Comparative Pathology 151(4),
410–419.
Whelan, A.O., Coad, M., Cockle, P.J., Hewinson, G., Vordermeier, M. and Gordon, S.V. (2010) Revisiting
host preference in the Mycobacterium tuberculosis complex: experimental infection shows M. tuber-
culosis H37Rv to be avirulent in cattle. PLoS One 5(1), e8527.
Whipple, D.L., Clarke, P.R., Jarnagin, J.L. and Payeur, J.B. (1997) Restriction fragment length polymor-
phism analysis of Mycobacterium bovis isolates from captive and free-ranging animals. Journal of
Veterinary Diagnostic Investigation 9(4), 381–386.
Wirth, T., Hildebrand, F., Allix-Beguec, C., Wolbeling, F., Kubica, T., et al. (2008) Origin, spread and demog-
raphy of the Mycobacterium tuberculosis complex. PLoS Pathogens 4(9), e1000160.
Wlodarska, M., Johnston, J.C., Gardy, J.L. and Tang, P. (2015) A microbiological revolution meets an
ancient disease: improving the management of tuberculosis with genomics. Clinical Microbiology
Reviews 28(2), 523–539.
Wright, D.M., Allen, A.R., Mallon, T.R., McDowell, S.W., Bishop, S.C., et al. (2013a) Detectability of bovine
TB using the tuberculin skin test does not vary significantly according to pathogen genotype within
Northern Ireland. Infection, Genetics and Evolution 19, 15–22.

Free download pdf