Fundamentals of Medicinal Chemistry

(Brent) #1
MR¼

(n^2 1)M

(n^2 þ2)r

(4:9)

wherenis the refractive index,Mthe relative mass andrthe density of the

compound. TheM/rterm is a measure of the molar volume whilst the refractive

index term is a measure of the polarizability of the compound. Although MR is

calculated for the whole molecule, it is an additive parameter, and so the MR

values for a molecule can be calculated by adding together the MR values for its

component parts (Table 4.7).

Table 4.7 Examples of calculated MR values. Reproduced by permission of John Wiley and Sons


Ltd. from Hansch C. and Leo A.J.Substituents Constants for Correlation Analysis in Chemistry and


Biology(1979)


Group MR Group MR Group MR


H– 1.03 F– 0.92 CH 3 O– 7.87


CH 3 – 5.65 Cl– 6.03 HO– 2.85


C 2 H 5 – 10.30 F 3 C– 5.02 CH 3 CONH– 14.93


(CH 3 ) 2 CH– 14.96 O 2 N– 7.63 CH 3 CO– 11.18


4. 4. 3. 3 Other parameters

These can be broadly divided into those that apply to sections of the molecule

and those that involve the whole molecule. The former include parameters such

as van der Waals’ radii, Charton’s steric constants and the Verloop steric

parameters. The latter range from relative molecular mass (RMM) and molar

volumes to surface area. They have all been used to correlate biological activity

to structure with varying degrees of success.

4.4.4 Hansch analysis


Hansch analysis attempts to mathematically relate drug activity to measurable

chemical properties. It is based on Hansch’s proposal that drug action could be

divided into two stages:

1. the transport of the drug to its site of action;

2. the binding of the drug to the target site.

QUANTITATIVE STRUCTURE–ACTIVITY RELATIONSHIPS (QSARS) 85

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