Fundamentals of Medicinal Chemistry

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produced. These signals are in the form of specific sequences of bases. The

RNA produced by transcription is known as either heterogeneous nuclear

RNA (hnRNA),premessenger RNA (pre-mRNA)or primary transcript RNA

(ptRNA).

1.6.5 Classification and function of RNA


Ribonucleic acids are classified according to their general role in protein syn-

thesis.

Messenger RNA (mRNA)is believed to be produced from the hnRNA formed

by transcription in the nucleus. The introns are removed and the remaining

exons are spliced together to form a continuous sequence of bases that are

complementary to the gene’s exons. The mRNA now leaves the nucleus via

nuclear pores and carries its message to the ribosome in the cytoplasm. It binds

to the ribosome, where it dictates the order in which the amino acids are

linked to form the structure of the protein This information is carried in the

form of a trinucleotide code known as acodon. The nature of a codon is

indicated by a sequence of letters corresponding to the 5’to 3’order of bases

in the trinucleotide. Some amino acids have more than one codon. The mRNA’s

codon code is known as thegenetic code(Table 1.9) and is used by all living

Table 1.9 The genetic code. The start codon is always AUG. Some codons act as start and stop


signals in protein synthesis. Codons are always written left to right, 5’to 3’


Code Amino acid Code Amino acid Code Amino acid Code Amino acid


UUU Phe CUU Leu AUU Ile GUU Val


UUC Phe CUC Leu AUC Ile GUC Val


UUA Leu CUA Leu AUA Ile GUA Val


UUG Leu CUG Leu AUG Met GUG Val


UCU Ser CCU Pro ACU Thr GCU Ala


UCC Ser CCC Pro ACC Thr GCC Ala


UCA Ser CCA Pro ACA Thr GCA Ala


UCG Ser CCG Pro ACG Thr GCG Ala


UAU Tyr CAU His AAU Asn GAU Asp


UAC Tyr CAC His AAC Asn GAC Asp


UAA Stop CAA Gln AAA Lys GAA Glu


UAG Stop CAG Gln AAG Lys GAG Glu


UGU Cys CGU Arg AGU Ser GGU Gly


UGC Cys CGC Arg AGC Ser GGC Gly


UGA Stop CGA Arg AGA Arg GGA Gly


UGG Trp CGG Arg AGG Arg GGG Gly


NUCLEIC ACIDS 33

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