Fundamentals of Medicinal Chemistry

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compound by less reactive C–C, C–O and C–N bonds are likely to be irrevers-

ibly attached to the lead structure. Groups that are linked to the lead by ester,

amide, phosphate, sulphate and glycosidic links are more likely to be metabol-

ized from the resulting analogue to reform the parent lead compound as the

analogue is transferred from its point of administration to its site of action.

Compounds with this type of solubilizing group are acting as prodrugs

(see section 9.8) and so their activity is more likely to be the same as the

parent lead compound. However, the rate of loss of the solubilizing group will

depend on the nature of the transfer route, and this could affect the activity of

the drug.

3.6.3 The position of the water solubilizing group


In order to preserve the type of activity exhibited by the lead compound, the

water solubilizing group should be attached to a part of the structure that is not

involved in the drug–receptor interaction. Consequently, the route used to

introduce a new water solubilizing group and its position in the lead structure

will depend on the relative reactivities of the pharmacophore and the rest of the

molecule. The reagents used to introduce the new water solubilizing group

should be chosen on the basis that they do not react with, or in close proximity

to, the pharmacophore. This will reduce the possibility of the new group

affecting the relevant drug–receptor interactions.

3.6.4 Methods of introduction


Water solubilizing groups are best introduced at the begining of a drug

synthesis, although they may be introduced at any stage. Introduction at the

begining avoids the problem of a later introduction changing the type and/or

nature of the drug–receptor interaction. A wide variety of routes may be used to

introduce a water solubilizing group; the one selected will depend on the type

of group being introduced and the chemical nature of the target structure

(Figures 3.6 and 3.7). Many of these routes require the use of protecting agents

to prevent unwanted reactions of either the water solubilizing group or the lead

structure.

THE INCORPORATION OF WATER SOLUBILIZING GROUPS IN A STRUCTURE 67

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