Specimen Processing
Molecular Diagnostics
(MDx) Review 547
SAMPLE PREPARATION
Blood or bone marrow
Plasma
Tissue
Bacteria/fungi
*Avoid frost-free freezers because of temp variation. Thawed samples should be thoroughly mixed before testing.
Whole blood can be stored at 2°–25°C for 24–48 hr after collection.
Separate WBCs by:
- Differential lysis in hypotonic buffer or water (RBCs lysed, WBCs precipitated by centrifugation) or
- Density gradient centrifugation in Ficoll to isolate mononuclears
WBCs can be stored at –70°C for up to a year*
Remove from RBCs promptly & hold at –20°C or below. *
Fresh or frozen: grind, homogenize, or mince
Embedded: deparaffinize in xylene, rehydrate in ↓concentrations of ethanol
Break cell walls (enzymes, detergents, NaOH, boiling, or glass beads). Enzyme treatment—less damage
to chromosomal DNA. NaOH & boiling yield ssDNA. Not suitable for restriction enzyme analysis. OK for
amplification.