Lake Pavin History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake

(Chris Devlin) #1

328


tribute to temporal changes in microbial diversity. mbio
5(4):e01371–0e1414
Shi X, Marie D, Jardillier L, Scanlan DJ, Vaulot D (2009) Groups
without cultured representatives dominate eukaryotic picophyto-
plankton in the oligotrophic South East Pacifi c Ocean. PLoS One
4:7657
Smith VH, Foster BL, Grover JP, Holt RD, Leibold MA, De Noyelles F
(2005) Phytoplankton species richness scales consistently from
laboratory microcosms to the world’s oceans. Proc Natl Acad Sci U
S A 102:4393–4396
Sogin ML, Morisson HG, Huber JA et al (2006) Microbial diversity in
the deep sea and the underexplored “rare biosphere”. Proc Natl
Acad Sci U S A 103:12115–12120
Stickney HL, Hood RR, Stoecker DK (2000) The impact of mixotrophy
on planktonic marine ecosystems. Ecol Model 125:203–230
Stockner JG, Antia NJ (1986) Algal picoplankton from marine and
freshwater ecosystems: a multidisciplinary perspective. Can J Fish
Aquat Sci 43:2472–2503
Taib N, Mangot J-F, Domaizon I, Bronner G, Debroas D (2013)
Phylogenetic affi liation of SSU rRNA genes generated by massively
parallel sequencing: new insights into the freshwa- ter protist diver-
sity. PLoS ONE 8, e58950
Tarbe AL, Stenuite S, Balagu V, Sinyinza D, Descy JP et al (2011)
Molecular characterisation of the small-eukaryote community in a
tropical Great Lake (Lake Tanganyika, East Africa). Aquat Microb
Ecol 62:177–190
Temponeras M, Kristiansen J, Moustaka-Gouni M (2000) Seasonal
variation in phytoplankton composition and physical-chemical fea-
tures of the shallow Lake Doı ̈rani, Macedonia, Greece.
Hydrobiologia 424:109–122


Tittel J, Wiehle I, Wannicke N, Kampe H, Poerschmann J, Meier J et al
(2009) Utilisation of terrestrial carbon by osmotrophic algae. Aquat
Sci 71:46–54
Troost TA, Kooi BW, Kooijman SA (2005) Ecological specialization of
mixotrophic plankton in a mixed water column. Am Nat
166:45–61
Ukeles R, Rose WE (1976) Observations on organic carbon utilization
by photosynthetic marine micro- algae. Mar Biol 37:11–28
Van Hannen EJ, Mooij W, van Agterveld MP, Gons HJ, Laanbroek HJ
(1999) Detritus- dependent development of the microbial commu-
nity in an experimental system: qualitative analysis by denaturing
gradient gel electrophoresis. Appl Environ Microbiol
65:2478–2484
Vaulot D, Eikrem W, Viprey M, Moreau H (2008) The diversity of small
eukaryotic phytoplankton (<3 μm) in marine ecosystems. FEMS
Microbiol Rev 32:795–820
Viprey M, Guillou L, Ferreol M, Vaulot D (2008) Wide genetic diver-
sity of picoplanktonic green algae (Chloroplastidia) in the
Mediterranean Sea uncovered by a phylum-biased PCR approach.
Environ Microbiol 10:1804–1822
Weisse T (2008) Distribution and diversity of aquatic protists: an evolu-
tionary and ecological perspective. Biodivers Conserv 17:243–259
Zhou J, Kang S, Schadt CW, Garten CT (2008) Spatial scaling of func-
tional gene diversity across various microbial taxa. PNAS
105:7768–7773
Zhu F, Massana R, Not F, Marie D, Vaulot D (2005) Mapping of picoeu-
caryotes in marine ecosystems with quantitative PCR of the 18S
rRNA gene. Fems Microbiol Ecol 52:79–92
Zubkov MV, Tarran GA (2008) High bacterivory by the smallest phyto-
plankton in the North Atlantic Ocean. Nature 455:224–226

C. Lepère et al.
Free download pdf