Systems Biology (Methods in Molecular Biology)

(Tina Sui) #1
Lyapunov function forpif for certain neighborhoodNofpthe
following conditions hold:

1.V(x)>0 for everyx 6 ¼pinNandV(p)¼ 0


  1. The Eulerian derivative,dV xdtðÞ<0 for everyxinN.


In this way, it can be stated for alltt 0 thatpis globally
asymptotically stable, i.e., the system evolves to a minimum of the
functionV(x).
Thus, we have that the entropy production per unit time meets
the necessary and sufficient conditions for Lyapunov function
[26]. Indeed:

S_i¼fðÞΩ > 0 ð 17 Þ
whereΩis the vector of control parameters. The Eulerian derivative
(Eq.17) must meet

dS_i
dt

¼

∂S_i
∂Ω


dt

< 0 ð 18 Þ

3 What Can Be Learned from a Phase Transition in Tumor Growth?


The thermodynamics formalism of irreversible processes [17], sys-
tems biology [3], and complex systems theory [27] offers a theo-
retical framework appropriate for the characterization of the
emergence and evolution of cancer. In such a sense, in a previous
work [28], we presented a conceptual definition of the cancer,
which is expressed as follows: “Cancer is a generic name given to a
complex network of interactions of malignant cells, which have lost
their specialization and control over normal growth. This network of
malignant cells could be considered a nonlinear dynamical system,
self-organized in time and space, far from thermodynamic equilib-
rium, exhibiting high complexity[29],robustness[30],and adapt-
ability[31]”.
Tumor cells show two aspects of robustness: functional redun-
dancy, due to cellular heterogeneity, and those arising because of
feedback control systems [28]. The robustness of tumor cells allows
a system to maintain its functionality against various external and
internal perturbations [28]. The control of the robustness of the
tumor cells constitutes a potential strategy for the development of
drugs and therapies.
The evolution of a tumor runs through three basic stages:
avascular, vascular, and metastasis [32]. In the avascular stage, the
tumor grows to a state known as “dormant” state [33], with a
microscopic nature (1 mm diameter). This dormant stage can
remain silent for a long time and is not macroscopically perceptible.
For reasons that are still unknown [34], the tumors that are in
the dormant state leave this state and begin a process of

Parameters Estimation in Phase-Space Landscape Reconstruction of Cell Fate... 133
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