Quorum Sensing

(sharon) #1
(Millipore, Temecula, CA, USA). All primary Abs are diluted in
blocking buffer.


  1. Secondary Abs for Fluorescence Staining: Alexa Fluor 568-
    conjugated goat anti-mouse (Life Technologies, Grand Island,
    NY, USA); Alexa Fluor 488-conjugated goat anti-rabbit
    (Life Technologies, Grand Island, NY, USA); Atto 647 N
    (fluorophore for STED) goat anti-mouse Abs (Active Motif,
    Carlsbad, CA, USA). All secondary Abs are diluted in blocking
    buffer.

  2. Primary Abs for Immunoblot Analysis: anti-ZO-3 (Thermo
    Fisher Scientific, Rockford, IL, USA); anti-JAM-A (Thermo
    Fisher Scientific, Rockford, IL, USA). All primary Abs are
    diluted in blocking buffer. Recommended dilution for primary
    Abs is 1:1000 in blocking buffer.

  3. Secondary Abs for Immunoblot Analysis: IRDye 800CW (LI-
    COR Biosciences, Cambridge, UK); IRDye 680CW (LI-COR
    Biosciences, Cambridge, UK). All secondary Abs are diluted in
    blocking buffer: 5% nonfat milk in 1PBS pH 7.6, supple-
    mented with 0.18% Tween 20. Recommended dilution for
    secondary Abs is 1:10,000.

  4. Krebs-Ringer glucose phosphate buffer (KRG): 120 mM
    NaCl, 4.9 mM KCl, 1.2 mM MgSO 4 , 8.3 mM KH 2 PO 4 ,
    1 mM CaCl 2 , 10 mM glucose.

  5. For Immunoblot analysis, immunoreactive bands are visualized
    by using a capable imaging system and the density ratios of the
    bands are quantified by image analysis software.

  6. Fetal bovine serum is heat treated at 55C for 30 min, ali-
    quoted, and then stored at 20 C.

  7. Dulbecco’s Modified Eagle’s Medium (DMEM) is supplemen-
    ted with 10% heat-inactivated fetal bovine serum as well as
    100 U/ml penicillin, 100μg/ml streptomycin, 1% nonessen-
    tial amino acids, and 2 mML-glutamine. For the remainder of
    this protocol, this standard culture medium will be referred to
    as “growth medium” (GM).

  8. Human epithelial colorectal adenocarcinoma Caco-2 cells
    (#86010202, obtained directly from Sigma Aldrich, St.
    Louis, MO, USA) are used for the experiments described
    here throughout this protocol. Caco-2 cells are grown in GM
    at 37Cin5%CO 2 and passaged weekly upon reaching 80%
    confluence for a total of 84–95 passages.

  9. For experiments, Caco-2 cells are grown in GM at 37Cin5%
    CO 2 for 7–10 days until the cells become matured and differ-
    entiated, establishing polarized epithelial monolayers on the
    specified growth surface.


216 Jake Everett et al.

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