RNA Detection

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References



  1. Tyagi S, Kramer FR (1996) Molecular beacons:
    probes that fluoresce upon hybridization. Nat
    Biotechnol 14(3):303–308. doi:10.1038/
    nbt0396-303

  2. Sato S, Watanabe M, Katsuda Y, Murata A,
    Wang DO, Uesugi M (2015) Live-cell imaging
    of endogenous mRNAs with a small molecule.
    Angew Chem 54(6):1855–1858. doi:10.1002/
    anie.201410339

  3. Oomoto I, Suzuki-Hirano A, Umeshima H,
    Han YW, Yanagisawa H, Carlton P, Harada Y,
    Kengaku M, Okamoto A, Shimogori T, Wang
    DO (2015) ECHO-liveFISH: in vivo RNA
    labeling reveals dynamic regulation of nuclear
    RNA foci in living tissues. Nucleic Acids Res 43
    (19):e126. doi:10.1093/nar/gkv614

  4. Okamoto A (2011) ECHO probes: a concept of
    fluorescence control for practical nucleic acid
    sensing. Chem Soc Rev 40(12):5815–5828.
    doi:10.1039/c1cs15025a

  5. Kohler O, Jarikote DV, Seitz O (2005) Forced
    intercalation probes (FIT probes): thiazole


orange as a fluorescent base in peptide nucleic
acids for homogeneous single-nucleotide-poly-
morphism detection. Chembiochem 6
(1):69–77. doi:10.1002/cbic.200400260


  1. Hovelmann F, Gaspar I, Loibl S, Ermilov EA,
    Roder B, Wengel J, Ephrussi A, Seitz O (2014)
    Brightness through local constraint–LNA-
    enhanced FIT hybridization probes for in vivo
    ribonucleotide particle tracking. Angew Chem
    53(42):11370–11375. doi:10.1002/anie.
    201406022

  2. Ghosh S, Marchand V, Gaspar I, Ephrussi A
    (2012) Control of RNP motility and localization
    by a splicing-dependent structure in oskar
    mRNA. Nat Struct Mol Biol 19(4):441–449.
    doi:10.1038/nsmb.2257

  3. Zimyanin VL, Belaya K, Pecreaux J, Gilchrist
    MJ, Clark A, Davis I, St Johnston D (2008) In
    vivo imaging of oskar mRNA transport reveals
    the mechanism of posterior localization. Cell
    134(5):843–853. doi:10.1016/j.cell.2008.06.
    053


In vivo mRNP Detection by FIT Probes 287
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