Caspases,Paracaspases, and Metacaspases Methods and Protocols

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  1. Power pack supply with constant current optional settings.

  2. Wash buffer: PBS with 0.05 % Tween-20 (PBS-T).

  3. Membrane blocking buffer: 3 % nonfat milk or 3 % bovine
    serum albumin (BSA) in PBS.

  4. Caspase-2 antibody: 1 μg/ml anti-caspase-2 rat monoclonal
    antibody (clone 11B4) diluted in 3 % skim milk in PBS-T
    ( see Note 3 ).

  5. Secondary antibody: anti-rat secondary antibody conjugated
    to alkaline phosphatase (AP) or horse radish peroxidase (HRP).

  6. Protein detection solutions: enhanced chemifl uorescence
    (ECF) (AttoPhos, GE Healthcare/Amersham) or enhanced
    chemiluminescence (ECL) (ECL Plus GE Healthcare/
    Amersham).

  7. X-ray fi lm and an X-ray developing machine for ECL
    detection.

  8. Laser scanner for fl uorescent detection of proteins, such as the
    Typhoon FLA 7000 Image Scanner for ECF detection (GE
    Healthcare/Amersham).

  9. Affi nity label biotin-VAD-FMK is prepared as 10 mM stock in
    DMSO, aliquoted and stored at −70 °C.

  10. Affi nity Label Dilution Buffer: 50 mM HEPES-KOH pH 7.0,
    50 mM NaCl, 1 mM MgCl 2 , 1 mM ethylene glycol-bis
    [β-aminoethyl ether]- N , N , N ′, N ′-tetraacetic acid (EGTA),
    1 mM EDTA, 1 mM DTT, and supplemented with protease
    inhibitor cocktail.

  11. Cell Lysis Buffer: 50 mM HEPES-KOH pH 7.0, 50 mM
    NaCl, 1 mM EDTA, 1 mM MgCl 2 , 5 mM DTT, 0.1 % CHAPS,
    1 mM phenylmethanesulfonyl fl uoride (PMSF), and supple-
    mented with protease inhibitor cocktail.

  12. Streptavidin Sepharose.

  13. 2× Protein Loading Buffer (PLB).

  14. Rotating platform at 4 °C.

  15. Bench top centrifuge.


3 Methods



  1. A bacterial expression plasmid containing the caspase-2 coding
    region in frame of a C-terminal 6×His tag (pET-Caspase-2) or
    GST-tag (pGEX-Caspase-2) ( see Note 4 ) is transformed into
    BL21 cells (typically cells that express lysozyme such as BL21-
    star or BL21-pLysE) using a standard heat shock method, and


2.8 Affi nity Capture
of Active Caspase-2


3.1 Purifi cation of
Active Recombinant
Caspase-2


Loretta Dorstyn and Sharad Kumar

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