A Practical Guide to Cancer Systems Biology

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62 A Practical Guide to Cancer Systems Biology


interested in the analysis of other types of NGS dataset are directed to follow
the tutorial available at Refs. 10, 11.


Acknowledgments


We specially thank the Galaxy team for their efforts on development and
maintenance of Galaxy.


References



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  4. Harrow J, Frankish A, Gonzalez JMet al.(2012) GENCODE: The reference human
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  6. Kim D, Langmead B, and Salzberg SL. (2015) HISAT: A fast spliced aligner with
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  8. Anders S, Pyl PT, and Huber W. (2015) HTSeq — A Python framework to work
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  9. Love MI, Huber W, and Anders S. (2014) Moderated estimation of fold change and
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  10. Blankenberg D and Hillman-Jackson J. (2014) Analysis of next-generation sequencing
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  11. Blankenberg D, Von Kuster G, Coraor Net al.(2010) Galaxy: A web-based genome
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