32 Chapter 2
atoms are arranged three-dimensionally in space. Stereoiso-
mers include (1) those that are designated as cis (Latin for “on
this side”) and trans (meaning “across”), where two functional
groups are located either on the same side ( cis ) or across from
each other ( trans ) in the molecule ( fig. 2.13 a ); and (2) enan-
tiomers (also called optical isomers ) that are mirror images of
each other ( fig. 2.13 b ). Enantiomers are like a left- and right-
hand glove; if the palms are both facing in the same direction,
they cannot be superimposed on each other. By convention,
one enantiomer is often designated the D -isomer (for dextro,
or right-handed) and the other is designated the L -isomer (for
levo, or left-handed).
These subtle differences in structure are extremely impor-
tant biologically. They ensure that enzymes—which interact
one can correctly refer to the molecule as either lactic acid or
lactate.
Stereoisomers
Stereoisomers are molecules that have the same atoms in the
same sequence, but differ from each other in the way their
Figure 2.10 Various functional groups of organic
molecules. The general symbol for any functional group is
R. Specific functional groups are indicated within the gold
rectangles.
Carbonyl (CO)
Carboxyl (COOH)
Hydroxyl (OH)
Sulfhydryl (SH)
Amino (NH 2 )
Phosphate (H 2 PO 4 )
C CCC
O
CC
C
O
CCCC OH
P
O
OH
CCCCCO OH
OH
CCCCC
SH
CCCCC
NH 2
CCCCC
Figure 2.11 Categories of organic molecules based
on functional groups. Acids, alcohols, and other types of organic
molecules are characterized by specific functional groups.
Ketone Organic acid
Aldehyde Alcohol
C
O
CH 3 CH 3 C
O
CH 3 OH
C
H
H
C CH 3 OH
O
CH 3 H
Figure 2.12 The carboxyl group of an organic
acid. This group can ionize to yield a free proton, which is a
hydrogen ion (H^1 ). This process is shown for lactic acid, with the
double arrows indicating that the reaction is reversible.
H CC
H
H
OH
H OH
C
O
H CC
H
H
+ H+
OH
H O–
C
O
Lactic acid Lactate
Figure 2.13 Stereoisomers. ( a ) Stereoisomers include
molecules such as butene, which can have its methyl groups
(CH 3 ) on either the same side ( cis ) or the opposite side ( trans ) of
the molecule. ( b ) Other stereoisomers are enantiomers (optical
isomers), which are mirror images of each other. Using the
molecule glyceraldehyde as a reference, these can be designated
as either D or L isomers.
CC
HH
cis-2-butene trans-2-butene
CH
CH 2 OH
OH
C
H O
CHO
CH 2 OH
H
C
H O
D-glyceraldehyde L-glyceraldehyde
H 3 CCH 3
CC
H
H 3 C H
CH 3
(a)
(b)