AMPK Methods and Protocols

(Rick Simeone) #1

  1. Paraformaldehyde is a carcinogen, therefore gloves and a mask
    should be worn when preparing this solution.

  2. Removing serum in this way places cells into a quiescent state,
    thereby reducing background signalling. In the case of
    HUVECs and 3T3-L1 adipocytes, cells should not be quiesced
    for any longer than 7 h, as significant apoptosis occurs after
    this time.

  3. Use serum-free DMEM when quiescing fibroblasts and
    adipocytes.

  4. KRH is a simple buffer that reduces background signalling
    even further and abrogates the need for an incubation in a
    CO 2 atmosphere. It is important to let cells adjust to this
    transition to another buffer prior to adding test substances.
    This step can be omitted and experiments continued untilstep
    9 if required, although all incubations insteps 1– 8 would need
    to occur in a CO 2 incubator.

  5. Add the smallest volume of a concentrated stock that is feasible,
    thereby minimizing the volume of DMSO being added.

  6. It is not essential that the test substances such as IL-1β, DMSO,
    and A769662 are sterile; however, any steps involving washing
    with Medium 199 or DMEM should be performed in a cell
    culture hood so as not to contaminate the medium for future
    use. Using a repeat pipette when adding compounds/cytokines
    will also improve speed and accuracy.

  7. In the case of 3T3-L1 adipocytes, fix for 30 min.

  8. Take a 21 G needle, and bend the very tip using a pair of
    forceps. This, in combination with fine hooked forceps (i.e.,
    one in each hand), allows you to easily maneuver the coverslip
    in and out of the plate.

  9. Fixed cells can be stored at 4C in 0.5 ml/well PBS at this point,
    or the protocol can be continued as described fromstep 13.

  10. For 3T3-L1 adipocytes, simultaneously permeabilize and block
    cells in 400μl/well of PBS supplemented with 2% (w/v) BSA,
    0.1% (w/v) Saponin and 20 mM glycine for 20 min. Adipo-
    cytes have cholesterol-rich membranes; therefore saponin is an
    effective detergent to permeabilize membranes as it selectively
    removes cholesterol. After this, go tostep 16and follow the
    protocol from there.

  11. The serum used to block nonspecific interactions should be
    from the animal the secondary antibody is raised in. If using
    multiple antibodies for co-staining, ensure that no uninten-
    tional cross-reactions can occur between primary and second-
    ary antibodies.


316 Sarah J. Mancini and Ian P. Salt

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