AMPK Methods and Protocols

(Rick Simeone) #1

  1. Nontreated 24-well plates.

  2. Bicinchoninic acid protein assay reagent from Pierce.

  3. Synthetic SAMS peptide (HMRSAMSGLHLVKRR).

  4. [γ-^32 P]ATP 3000 Ci/mmol, 10 mCi/ml.

  5. Assay buffer (5): 20 mM HEPES (pH 7), 400 mM NaCl,
    5 mM DTT, 25 mM AcMg2+, 1 mM SAMS peptide,
    1 mM AMP.

  6. Hot ATP (5), for 200 ml: 10 ml of ATP 3000 Ci/mmol,
    10 ml mCi/ml; 40 ml of 10 mM ATP (cold, in 25 mM Tris,
    pH 8.0), H 2 O up to 200 ml.

  7. Whatman P81 paper (2 cm^2 square pieces, labeled)

  8. Orthophosphoric acid.

  9. Acetone.

  10. Scintillation liquid or water.

  11. Scintillation vials.

  12. Scintillation counter.


Western Blot of AMPK Targets



  1. Isolated islets.

  2. Benchtop microcentrifuge (1.5 ml tubes).

  3. Phosphate-buffered saline (PBS): 137 mM NaCl, 2.7 mM KCl,
    10 mM Na 2 HPO 4 , 1.8 mM KH 2 PO 4 , pH 7.4.

  4. RIPA buffer: 150 mM NaCl, 10 mM Tris, pH 7.2, 5 mM
    EDTA, 0.1% (w/v) SDS, 1% (w/v) sodium deoxycholate, 1%
    (v/v) Triton X-100, protease and phosphatase inhibitors
    cocktails.

  5. 6SDS sample buffer: 375 mM Tris–HCl, pH 6.8, 12% (w/v)
    SDS, 60% (v/v) glycerol, 0.6 M DTT, 0.06% (w/v)
    bromophenol blue.

  6. Mini-Protean electrophoresis system (BioRad).

  7. 8% polyacrylamide gels.

  8. PVDF membrane.

  9. Transfer buffer: 25 mM Tris-base, 192 mM glycine, and 10%
    (v/v) methanol.

  10. Blocking solution: PBS, 0.1% (v/v) Tween 20, 5% (w/v) semi-
    skimmed milk.

  11. Washing buffer: PBS, 0.1% (v/v) Tween 20.

  12. Antibodies: anti-ACC (3662, cell signaling), phospho-ACC
    (Ser79) (3661, cell signaling), Raptor (2280, cell signaling),
    phospho-raptor (Ser792) (2083, cell signaling), AMPKα
    (2532, cell signaling), phospho-AMPKα(Thr172) (2535, cell
    signaling), goat anti-rabbit IgG-HRP (AB6721, Abcam).


Manipulation and Measurement in Islets 417
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