AMPK Methods and Protocols

(Rick Simeone) #1

  1. For mice preparations, use lighter pressure or the kidney tissue,
    and/or a thinner cover (based on the original cover depicted in
    Fig. 2d) can be built to modify the Stadie-Riggs tissue slicer.

  2. AMPK activator: 5-Amino-1-β-D-ribofuranosyl-imidazole-4-
    carboxamide (AICAR). Use at a final concentration of
    1–2 mM.

  3. AMPK activator: 200μM A769662 (seeNote 9).

  4. Glass scintillation vials for incubation of the slices. Label one
    vial per incubation condition. The vial must have a perforated
    cap through which to feed a “capillary” tubing through
    the cap.

  5. At least two beakers with CO 2 -equilibrated Ringer buffer to
    hold slices until they are placed in the treatment vials.

  6. Set up a system of manifolds for gas delivery to the Ringer
    buffer solution (stock and for each of the slice incubation
    conditions). Use CO 2 impermeant tubing.

  7. Water bath with holders for the scintillation vials. Set the bath
    at 37C.

  8. Gas tank with appropriate regulator (5% CO 2 /balance air).

  9. 1phosphate-buffered saline (PBS) without calcium and mag-
    nesium: 138 mM NaCl, 2.7 mM KCl, 1.5 mM KH 2 PO 4 ,
    8mMNa 2 HPO 4 ·7H 2 O, pH 7.4. Check pH prior to use.
    Prepare on the day of the experiment and keep at RT.

  10. Fixative for slices: 4% (w/v) paraformaldehyde in 1 PBS
    without calcium and magnesium (seeNote 10).

  11. Liquid nitrogen container with liquid nitrogen ready at the
    start of the experiment.

  12. Prepare at least one microcentrifuge tube per slice incubation
    condition for rapid freezing (with one venting hole in the
    cover). Storage of frozen slices at 80 C.

  13. Quenching buffer: 0.2 M NH 4 Cl in PBS. Add 2.1 g dry
    ammonium chloride (NH 4 Cl) to 500 mL glass beaker. Add
    1 PBS to 200 mL and use a stir bar to dissolve the ammonium
    chloride at RT. Quench buffer can be stored at RT.

  14. Cryoprotectant solution: 30% (w/v) sucrose, 0.02% (w/v)
    sodium azide in PBS. Prepare several days before the experi-
    ment and keep at 4C. Prepare 1 L of 1PBS with 0.02%
    sodium azide. Weigh 300 grams of sucrose and combine with
    ~800 mL of 1PBS with 0.02% sodium azide. Use a stir bar to
    slowly dissolve the sucrose in solution at room temperature.
    After the sucrose is completely dissolved, bring the solution to
    a total volume of 1 L by adding more 1PBS with 0.02%
    sodium azide.

  15. OCT from Tissue-Tek (cryo-embedding material).


AMPK Studies using Kidney Slices 453
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