Lake Pavin History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake
235 mended as a routine procedure (Bettarel et al. 2000 ). Besides, the fl uorochrome - based methods described previously used ...
236 observed. Infected prokaryotic cells were detected in the whole sediment core, and their vertical distribution corre- lated ...
237 14.5 Standing Stocks and Seasonal Patterns in Viral Dynamics The fi rst seasonal studies on viruses in Lake Pavin were con- ...
238 Fig. 14.6 Seasonal variations of viral abundance (Virus-Like- Particles, VLPs) in the epilimnion, metalimnion, and hypolimni ...
239 14.6 Activities of Viruses 14.6.1 Lytic Activity and Impact on Bacterial Community Composition and Metabolism It is now well ...
240 and Pradeep Ram 2005 ), likely through nutrient regeneration that favors certain bacterial phyla ( alpha - and beta- Proteob ...
241 This pattern has the strong feedback effect of preventing spe- cies dominance and enhanced species cohabitation within micro ...
242 14.7 Protistan Grazing of Viruses and Ecological Implications Despite the fact that bacteria are undoubtedly the principal c ...
243 (Project VIRULAC) and ANR Programme Biodiversité (Project AQUAPHAGE). We thank M. G. Weinbauer for critical and proofread- i ...
244 Miller RV, Ripp S, Relicon J, Ogunseitan OA, Kokjohn TA (1992) Virus-mediated gene transfer in freshwater environment. In: G ...
© Springer International Publishing Switzerland 2016 245 T. Sime-Ngando et al. (eds.), Lake Pavin, DOI 10.1007/978-3-319-39961-4 ...
246 experiments were based on sequencing after cloning a DNA fragment (ranging from 30 to 100 kb) in Escherichia coli. This meth ...
247 on the functional potential of freshwater bacterioplankton (Debroas et al. 2009 ) Actinobacteria were mainly associated with ...
248 a b Fig. 15.1 ( a ) Phylogeny of the class A ctinobacteria from concatenated proteins ArgB, ArgC ArgH, ArgR, InfC, TyrS, Phe ...
249 growth rate exists, although not strict, it also corroborates the observation of a moderate to low growth rates (Simek et al ...
250 cell counts (Herfort et al. 2009 ) and frequently retrieved in lakes (Restrepo-Ortiz et al. 2014 ). Due to lack of cultivate ...
251 the epilimnion and the oxycline of the Lake Pavin were low suggesting that lacustrine oxic water layers are not an obliga- t ...
252 isolated from diverse environments, including marine (Dunlap et al. 2013 ) and freshwater systems (López-Bueno et al. 2009 ) ...
253 Phylogenomic profi ling and genomic analyses of fresh- water Actinobacteria highlighted both reduced, AT-rich genomes and po ...
254 oxidizing crenarchaeote from a hot spring. Proc Natl Acad Sci U S A 105:2134–2139 Herfort L, Kim J, Coolen MJL, Abbas B, Sch ...
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