References 105127 Dame, R.T., Tark‐Dame, M., and Schiessel, H. (2011) A physical approach to
segregation and folding of the Caulobacter crescentus genome. Mol. Microbiol.,
82 , 1311–1315.
128 Hornus, S., Levy, B., Lariviere, D., and Fourmentin, E. (2013) Easy DNA
modeling and more with GraphiteLifeExplorer. PLoS One, 8 , e53609.
129 Takebayashi, S., Ryba, T., and Gilbert, D.M. (2012) Developmental control of
replication timing defines a new breed of chromosomal domains with a novel
mechanism of chromatin unfolding. Nucleus, 3 , 500–507.
130 Chen, H., Meisburger, S.P., Pabit, S.A., Sutton, J.L. et al. (2011) Ionic strength‐
dependent persistence lengths of single‐stranded RNA and DNA. Proc. Natl.
Acad. Sci. U.S.A., 109 , 799–804.
131 Hubner, M.R. and Spector, D.L. (2010) Chromatin dynamics. Annu. Rev. Biophys.,
39 , 471–489.
132 Jouffe, C., Cretenet, G., Symul, L., Martin, E. et al. (2013) The circadian clock
coordinates ribosome biogenesis. PLoS Biol., 11 , e1001455.
133 Nayak, M.K., Kulkarni, P.P., and Dash, D. (2013) Regulatory role of
proteasome in determination of platelet life span. J. Biol. Chem., 288 ,
6826–6834.
134 Weintraub, S.J. and Deverman, B.E. (2007) Chronoregulation by asparagine
deamidation. Sci. STKE, 2007 , re7.
135 Liu, C., Fu, X., Liu, L., Ren, X. et al. (2011) Sequential establishment of stripe
patterns in an expanding cell population. Science, 334 , 238–241.
136 Binder, P.M. and Danchin, A. (2011) Life’s demons: information and order in
biology. What subcellular machines gather and process the information
necessary to sustain life? EMBO Rep., 12 , 495–499.
137 Budovsky, A., Fraifeld, V.E., and Aronov, S. (2010) Linking cell polarity, aging
and rejuvenation. Biogerontology, 12 , 167–175.
138 Li, S., Ou, X.H., Wei, L., Wang, Z.B. et al. (2012) Septin 7 is required for orderly
meiosis in mouse oocytes. Cell Cycle, 11 , 3211–3218.
139 Balakrishnan, L. and Bambara, R.A. (2013) Okazaki fragment metabolism.
Cold Spring Harb. Perspect. Biol., 5 , a010173.
140 Smith, G.R. (2012) How RecBCD enzyme and Chi promote DNA break repair
and recombination: a molecular biologist’s view. Microbiol. Mol. Biol. Rev., 76 ,
217–228.
141 Rodrigo‐Brenni, M.C. and Hegde, R.S. (2012) Design principles of protein
biosynthesis‐coupled quality control. Dev. Cell, 23 , 896–907.
142 Prat, L., Heinemann, I.U., Aerni, H.R., Rinehart, J. et al. (2012) Carbon
source‐dependent expansion of the genetic code in bacteria. Proc. Natl. Acad.
Sci. U.S.A., 109 , 21070–21075.
143 Campbell, J.H., O’Donoghue, P., Campbell, A.G., Schwientek, P.
et al. (2013) UGA is an additional glycine codon in uncultured SR1
bacteria from the human microbiota. Proc. Natl. Acad. Sci. U.S.A., 110 ,
5540–5545.
144 Bonnet, J., Yin, P., Ortiz, M.E., Subsoontorn, P. et al. (2013) Amplifying genetic
logic gates. Science, 340 , 599–603.
145 Jung, K., Fried, L., Behr, S., and Heermann, R. (2012) Histidine kinases and
response regulators in networks. Curr. Opin. Microbiol., 15 , 118–124.