The Lotus japonicus Genome
Miyazawa H, Oka-Kira E, Sato N, Takahashi H, Wu GJ, Sato S, Hayashi M, Betsuyaku S, Nakazono M, Tabata S, Harada K, Sawa S, Fuku ...
Szczyglowski K, Parniske M (2002) A plant receptor- like kinase required for both bacterial and fungal symbiosis. Nature 417:959 ...
Part II Genomics and Functional Genomics of Lotus and the Microsymbionts ...
4 Genome Sequencing Shusei Sato and Stig U. Andersen Abstract The currentLotus japonicusreference genome sequence is based on a ...
vectors. The average insert sizes of the main TAC libraries were around 100 kb. In addition to the main libraries, TAC libraries ...
space coverage of v. 3.0 is ~98 % based on the placement of 57,916 de novo assembled RNA- seq contigs and 25,694 tentative conti ...
4.4 Repetitive Sequences Since the highly repetitive sequences in theL. japonicus genome tend to be excluded from scaffolds/cont ...
short tandem repeats in v. 3.0 was lower than the fraction in TAC end sequences, reflecting that the highly repetitive heterochr ...
Urbanski DF, Malolepszy A, Stougaard J, Andersen SU (2012) Genome-wide LORE1 retrotransposon muta- genesis and high-throughput i ...
5 Genome Sequence and Gene Functions inMesorhizobium loti and Relatives Kazuhiko Saeki and Clive W. Ronson Abstract Mesorhizobiu ...
whatM. lotiis and the range of bacterial species to be discussed. Secondly, we describe genome structures ofM. lotistrains with ...
isolated infield plant passage experiments that showed the horizontal transfer of a large gene cluster from ICMP3153 to indigeno ...
respectively. Such differences indicate that the island and plasmids have been acquired by hor- izontal gene transfer from other ...
infected nodules following a lengthy delay. These mutants were disrupted at the stage of infection thread (IT) development. Symb ...
exoUmutant on variousL. japonicusecotypes revealed that both host and environmental factors were linked to the requirement for E ...
nodgenes to synthesize LCO. It might be noted that theLotuscompounds that activate NodD for induction ofnodgenes have not been d ...
Table 5.1 Gene common among three symbiosis islands ofM. lotistrains Function Operon or gene MAFF303099 Other position R7A NZP20 ...
Table 5.1 (continued) Substrate transport dctABD mll5840, mlr5841– mlr5842 ML0370, ML0369– ML0368 mln074, mln075– mln077 mll7237 ...
5.4.2 Genes Involved in Nitrogen Fixation There are 28 conserved genes probably involved in nitrogenfixation and related reactio ...
chromosome (Kasai-Maita et al. 2013 ). It is also known that most rhizobia do not possess this gene to catalyze the condensation ...
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